Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2993 ATGGGTTCAAATACCAAGACTTTTACCTTTGAGGAGGTGACTAAGCACAATCACAGGAAGGATTGCTGGATTATAATAAATGGGAAGGTGTATGATGTCACCCCATTTTTGGATGATCATCCAGGAGGTGATGAAGTTTTAGTGACTGCAGCAGAGAAGGATGCCACCACTGATTTTGAAGATGTTGGCCATAGTGACTCAGCAATTGAGATGATGCAAACATACTATGTTGGGAAGGTTGACACCACCACTCTTCCAGCAAAGGTTACCACCAACAGTCCACGCCCACCAACACAAGCACCTGCCTATAACAATCAATCTTCTGGATTTGCTGTGAAGATCTTGCAGTACCTAGTGCCATTGCTGATATTGGGCCTTGCATTTGCTCTGCAGTACTATGGCAAAAGAAACAAGTCCACCGAGtcagaaatttga 435 0.4322 MGSNTKTFTFEEVTKHNHRKDCWIIINGKVYDVTPFLDDHPGGDEVLVTAAEKDATTDFEDVGHSDSAIEMMQTYYVGKVDTTTLPAKVTTNSPRPPTQAPAYNNQSSGFAVKILQYLVPLLILGLAFALQYYGKRNKSTESEI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2993 144 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Ssu4g2993 144 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Ssu4g2993 144 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Ssu4g2993 144 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Ssu4g2993 144 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Ssu4g2993 144 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 91 IPR036400 -
Ssu4g2993 144 PANTHER CYTOCHROME B5 ISOFORM C 1 137 - -
Ssu4g2993 144 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Ssu4g2993 144 PANTHER CYTOCHROME B5 1 137 - -
Ssu4g2993 144 SMART Cyt_b5_2 8 81 IPR001199 -
Ssu4g2993 144 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Ssu4g2993 144 Gene3D - 2 84 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2993 Ssu-Chr4 76467465 76471126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2993 1 137 NADPH P450 reductases AT5G53560 57.246 3.02e-58 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2993 K23490 - gmx:100305546 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0094 4 1619302 1623951 Ssu4g2993 4 76467465 76471126 PCT