Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu4g2912 | ATGTTCTTGAAGCTTCTAGAGGCTGTGCTCAAAACTGGGAACCGCATGAACGTGGGGACAAACCGTGGGGATGCACATGCATTCAAGCTTGATACGCTTCTCAAACTGGTTGATGTCAAAGGTGCAGATGGCAAAACCACTCTTCTTCACTTCGTCGTACAAGAAATAATCAGAACCGAAGGCGCTCGTCTCTCAAGTACCAATCAAACTCCAAACACAAACTTGAACGACGATGCTAAGTGTAGAAGGCTTGGCCTGCAAGTCGTCTCTAGTCTAAGTTCAGAGCTAGCGAATGTGAAGAAGGCCGCCGCGATGGATTCTGAAGTCCTCAGCAGTGAGGTTGCTAAACTCTCCAAAGGAATTGCACACATTACAGAGGTTGTGCAATTGACTGAAACATCAGGGTCAGATGAAAGCAGCCAGAAGTTCCGAGAGTCAATGAACAAGTTCATGAGAATGGCTGAGGAGGAGATTCTAAAAGTTCAAGCACAAGAAAGTGTTGCTTTGTCCCTTGTGAAGGAGATCACAGAGTATTTCCATGGGAACTTGTCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTGGTGAGAGACTTCTTAACAGTTCTTGATAGGGTGTGCAAAGAAGTTGGTATGATAAATGAGAGAACCATGGTTAGTTCTGCACATAGATTCCCTGTCCCTGTGAACCCTATGCTTCCACAACCCCTTCCTGGACTTATTGGAAAGAGACAATACAATTCCTCAGATGATGATAGTCCATCTCCTTAG | 774 | 0.4483 | MFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSSTNQTPNTNLNDDAKCRRLGLQVVSSLSSELANVKKAAAMDSEVLSSEVAKLSKGIAHITEVVQLTETSGSDESSQKFRESMNKFMRMAEEEILKVQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPVNPMLPQPLPGLIGKRQYNSSDDDSPSP | 257 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu4g2912 | 257 | Gene3D | Formin, FH2 domain | 1 | 225 | IPR042201 | - | |
| Ssu4g2912 | 257 | Pfam | Formin Homology 2 Domain | 1 | 204 | IPR015425 | - | |
| Ssu4g2912 | 257 | PANTHER | FORMIN-LIKE PROTEIN 1 | 1 | 257 | - | - | |
| Ssu4g2912 | 257 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 1 | 216 | - | - | |
| Ssu4g2912 | 257 | SMART | it6_source | 1 | 219 | IPR015425 | - | |
| Ssu4g2912 | 257 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1 | 230 | IPR015425 | - | |
| Ssu4g2912 | 257 | PANTHER | FORMIN-RELATED | 1 | 257 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu4g2912 | Ssu-Chr4 | 74359331 | 74360104 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ssu4g2912 | 1 | 246 | FH2 protein (formin) Gene Family | AT3G25500 | 79.675 | 3.47e-135 | 405 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu4g2912 | - | - | gmx:100800333 | 469.929 |