Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2850 ATGTTTAAGCTAGGAAGCAAGTGGAGAGGAACAGAACCGACCCAACAATGTTCAGTCACATACACGGGTGAACACAACTACCGTGCTCCTACTCATAGAAACTCTCTTGCTGGCTCCACGCACCACAAACCTCAAATTGAAGACGCTGCCACAAAACCGGATTCTCCAGCCACCTCAGGGGCGGAAGAAGAGGTGGCACAACACAGTGCAAAGTCAGAGAACACAGAAAAAGACATGGAAGATCTGATGAAAGATGATGAGGAACCAAATGAATTTGGCTTAATAGATACGGTGGTAACAAATGATTTCTTTGAGGGTTTAGAAGAACTGACAGGGTCTGCCACTGACCCCTTTACAACTAGTAGCTAG 369 0.4607 MFKLGSKWRGTEPTQQCSVTYTGEHNYRAPTHRNSLAGSTHHKPQIEDAATKPDSPATSGAEEEVAQHSAKSENTEKDMEDLMKDDEEPNEFGLIDTVVTNDFFEGLEELTGSATDPFTTSS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2850 122 Coils Coil 65 85 - -
Ssu4g2850 122 MobiDBLite consensus disorder prediction 1 91 - -
Ssu4g2850 122 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 118 IPR044810 GO:0003700
Ssu4g2850 122 MobiDBLite consensus disorder prediction 9 41 - -
Ssu4g2850 122 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 18 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2850 Ssu-Chr4 72929861 72930229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2850 19 122 WRKY Transcription Factor Family AT4G01250 43.860 1.06e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2850 K13425 - gmx:100815829 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2850 4 72929861 72930229 Ssu7g0832 7 16675560 16676908 ECH
Ssu4g2850 4 72929861 72930229 Ssu4g2850 4 72929861 72930229 ECH
Ssu4g2850 4 72929861 72930229 Ssu3g0676 3 16193524 16195071 ECH
Ssu3g0676 3 16193524 16195071 Ssu4g2850 4 72929861 72930229 PCT