Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu4g2838 | ATGTCAGTATACGACGCGGCGTTCGTGGACACGGAGCTCTCGAAGCGCACCTCCATCTTCGGGCTCCGCCTCTGGGTCGTCATCGGCGTCCTCGTCGGATCCCTCATCGTCATCACCCTCTTCCTCCTCTCCCTCTGCCTCGCCTcccgccgccgccgccaccacAAGCACCCACTCCGCCGCCGCCCCTCCGCCACGCCCGTCGTCTCCAAGGAGATCCTCGAGATCGTCGTCGTCCCCACGCAGCCGGACACCGTCCTCGCCCCGCCGCCCGCCAAGCGCGCCGCCGCGCACTCGAGCGGGGAGAGCCGGGGCGCCGCGAGCGCGTGCGAAACGGCGTCGTCGCTCGGCAGCGGGAGCGTGGGGCCCGAGGTGTCGCATCTCGGGTGGGGGAGGTGGTACACGCTCAGAGAACTCGAGGCCGCCACTAACGGGCTGTGCGACGAAAACGTGATTGGCGAAGGTGGCTACGGAATCGTGTACAGTGGGTTGTTACCTGATGGCACCAAGGTTGCTGTTAAGAACCTTTTGAATAATAAGGGCCAAGCCGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGTGTGCGGCACAAGAATCTTGTTAGGTTGCTTGGATATTGTGTTGAGGGGGCGTacagGATGCTTGTGTATGAATATATTGACAACGGGAATCTGGAACAGTGGCTGCATGGGGATGTTGGACCTGTAAGCCCTGTGACGTGGGATATCCGAATGAACATCATACTGGGCACGGCAAAAGGATTGGCTTATCTTCATGAGGGCCTTGAACCAAAAGTTGTCCACCGAGACGTGAAATCAAGCAACATACTGCTGGATCGCCAATGGAACCCAAAGGTTTCTGATTTTGGGCTTGCTAAGCTTTTGTATGCTGAGCATAGTTATGTCACCACTCGAGTCATGGGAACATTTGGTTATGTTGCACCAGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATGTGTATAGTTTTGGGATACTTATCATGGAAATAATTACTGGAAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTTAATTTAATAGAGTGGTTGAAAACTATGGTTGGGAATCGAAAATCCGAGGAAGTAGTTGATCCTAAGCTTGCTGAAAAGCCATCTTCAAAGGCTGTTAAACGGGCTCTGTTGGTTGCTCTTCGATGTGTTGACCCTGAAGCGGCAAAGAGACCTAAAATAGGACATGTGATCCACATGCTCGAGGCTGAGGACCTCTTATTCCGTGATGAACGAAGGACTGGAGGAGAATCTTCCCGTTCCCATCATGATTATCAACTAGAGCATAAGGACTCAAGACTAGACAAAAGGCAGATAGGTGGAGAGATTACTGATCAAAGTGAAGATGATAGTGGTAGATATCACCATCAGCCCACTAGATGGAGATAA | 1437 | 0.5143 | MSVYDAAFVDTELSKRTSIFGLRLWVVIGVLVGSLIVITLFLLSLCLASRRRRHHKHPLRRRPSATPVVSKEILEIVVVPTQPDTVLAPPPAKRAAAHSSGESRGAASACETASSLGSGSVGPEVSHLGWGRWYTLRELEAATNGLCDENVIGEGGYGIVYSGLLPDGTKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYIDNGNLEQWLHGDVGPVSPVTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLYAEHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIEWLKTMVGNRKSEEVVDPKLAEKPSSKAVKRALLVALRCVDPEAAKRPKIGHVIHMLEAEDLLFRDERRTGGESSRSHHDYQLEHKDSRLDKRQIGGEITDQSEDDSGRYHHQPTRWR | 478 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu4g2838 | 478 | MobiDBLite | consensus disorder prediction | 429 | 478 | - | - | |
Ssu4g2838 | 478 | ProSiteProfiles | Protein kinase domain profile. | 146 | 423 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g2838 | 478 | Gene3D | Phosphorylase Kinase; domain 1 | 127 | 221 | - | - | |
Ssu4g2838 | 478 | ProSitePatterns | Protein kinases ATP-binding region signature. | 152 | 174 | IPR017441 | GO:0005524 | |
Ssu4g2838 | 478 | PANTHER | OS01G0323000 PROTEIN | 1 | 469 | - | - | |
Ssu4g2838 | 478 | CDD | STKc_IRAK | 152 | 418 | - | - | |
Ssu4g2838 | 478 | Pfam | Protein kinase domain | 149 | 414 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g2838 | 478 | PANTHER | BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE | 1 | 469 | - | - | |
Ssu4g2838 | 478 | SUPERFAMILY | Protein kinase-like (PK-like) | 124 | 418 | IPR011009 | - | |
Ssu4g2838 | 478 | SMART | serkin_6 | 146 | 424 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g2838 | 478 | Gene3D | Transferase(Phosphotransferase) domain 1 | 222 | 430 | - | - | |
Ssu4g2838 | 478 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 268 | 280 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu4g2838 | Ssu-Chr4 | 72444489 | 72447375 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu4g2838 | 26 | 418 | Trihelix Transcription Factor Family | AT5G38560 | 41.832 | 1.31e-93 | 296 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-V | Ssu4g2838 | Pkinase | 1.1e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu4g2838 | - | - | gmx:100777348 | 826.239 |