Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu4g2810 | ATGCATGAAGTGTTGTGGCCTCTGATCCTTTTTCGATCCCAAATAACGGAAGAGAATGAGAGTGTCACTGGTAGGTTtgattatttaacagaaaaggacAGCTGGAAAATGGGAGGTTGCTGTTGTTCTGCCAGGAAACCTCACCTGCATGGAACACCAGTGTATTACCATTGCCCACCAACTTTAGGACAGCGTGAGTCTTTAACGTCTAATGATGGTACGGCTGCTTCACTCACTACTGGATTGCTGGTAGGCTTGAACCTGGAAACTTCCACTCCTGATACATACCAGCCCCCTCCTGCACCTCTACCTTATGATATAGTCCTGGGAGGTCCAGCATCAACAGATTCTGAATCAGGCAGAGAAACAGTTAGTGGTAGTAGCTTTGGAACATTAATTACATGTGAAGATCTTGAAGAATCTGACTGTAAAGCTAAAGCTAATTCAGAACCTATATCTCCAAGCAAGGCAGAACTGTCAAAATCAAATGAATTTCATGCATTAGTGACAGAAGAAGAGGACGGCTGTCCAATTTGCCTTGAAGaATATGATGATGAGAATCCTAAAACTCTGACAAAATGTGAACACCACTTTCACCTGTCTTGCATTCTTGAGTGGATGGAAAGAAGTGACTCCTGTCCTATATGCGATCAGGAGATGATATTTGACCAGACACTGAACTAG | 684 | 0.4211 | MHEVLWPLILFRSQITEENESVTGRFDYLTEKDSWKMGGCCCSARKPHLHGTPVYYHCPPTLGQRESLTSNDGTAASLTTGLLVGLNLETSTPDTYQPPPAPLPYDIVLGGPASTDSESGRETVSGSSFGTLITCEDLEESDCKAKANSEPISPSKAELSKSNEFHALVTEEEDGCPICLEEYDDENPKTLTKCEHHFHLSCILEWMERSDSCPICDQEMIFDQTLN | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu4g2810 | 227 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 153 | 223 | IPR013083 | - | |
Ssu4g2810 | 227 | Pfam | Ring finger domain | 176 | 216 | IPR001841 | - | |
Ssu4g2810 | 227 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 37 | 227 | - | - | |
Ssu4g2810 | 227 | SUPERFAMILY | RING/U-box | 167 | 223 | - | - | |
Ssu4g2810 | 227 | SMART | ring_2 | 176 | 216 | IPR001841 | - | |
Ssu4g2810 | 227 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED | 37 | 227 | - | - | |
Ssu4g2810 | 227 | ProSiteProfiles | Zinc finger RING-type profile. | 176 | 217 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu4g2810 | Ssu-Chr4 | 71596448 | 71599412 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu4g2810 | 37 | 227 | C3H Transcription Factor Family | AT4G00335 | 59.686 | 1.30e-77 | 230 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu4g2810 | - | - | gmx:100804435 | 431.409 |