Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu4g2802 | ATGGAAACTTGCACGGCTCTATTGCTTTTAACGGCGATCACAGCATACTTGATATGGTTCACGTTCATCTCACGGTCGCTGAAGGGTCCACGTGTCTGGGCCTTACTGGGCAGTCTCCCGGGCCTCATAGACAACTGTGACCGCATGCATGACTGGATCTGCGACAACCTACGCGCTTGTGGCGGCACGTACCAGACCTGCATCTGTGCAATCCCCTTCCTTGCCAAGAAGCAGGGTCTCGTGACTGTCACGTGCGACCCGAGGAACTTGGAGCACATACTCAAGACCCGGTTCGACAATTACCCCAAGGGCCCCACGTGGCATGCTGTGTTTCATGATCTGTTGGGTGATGGGATCTTTAATTCTGACGGTGACACGTGGCTGTTCCAGCGCAAGACTGCTGCGCTGGAATTCACCACGCGGACGCTGCGCCAAGCCATGGCTCGGTGGGTCAGCCGAGCCATCAATCAACTCTGCTTGATTCTTAAGAAGGCTAAGGATCAAACTGAGCCGGTTGATTTGCAAGACTTGATGCTTCGGCTCACTTTTGACAATATTTGTGGGTTGGCTTTCGGACGAGACCCACAAACTTGTGTGTTGGGCCTGCCCGATAACCGCTTTGCCACGGCTTTTGACCGAGCCACTGAAGCCTCACTCCAACGGTTCATTTTGCCAGAAGTGCTGTGGAAGTTGAAGAAATGGCTTCGGCTCGGAATGGAAGTCAGCTTGAGCCGAAGCCTTGTCCAGGTGGACGAGCACTTGTCAAGTGTAATTGAGAAACGTAAGGTGGAATTGCTGAGTCAGCAAAAAGATGGGACTCTTCATGATGACTTGTTGACTAGGTTTATGAAGAAAAAGGAATCCTACTCGGACAAGTTTCTCCAACACGTGGCATTGAATTTCATCCTAGCTGGACGTGACACTTCATCGGTTGCAATGTGCTGGTTCTTTTGGTTGGTGATTCAGAATCCTAAGGTGGAAGAAAAAATTCTACGTGAAATTTGCACGGTCCTGATAGAAACACGTGGCGACAACGTGACAAGGTGGTTGGATGAGCCGTTGGCGTTTGAGGAAGTGGACCGTTTGGTTTATCTCAAGGCTGCGTTGTCGGAGACGCTAAGGTTGTACCCTTCGGTGCCGGAGGACTCAAAGCATGTGGTGGCCGATGACGTGCTGCCGGACGGCACGTTTGTGCCGGCGGGGTCGTCGGTGACGTATTCGATATATTCGGCGGGGAGGTTGAAGTCCACGTGGGGTGAGGATTGCATGGAGTTTAGACCTGAGAGGTGGTTGTCATTGGATGGGACAAAGTTCATCATGCATGACTCTTTCAAGTTTGTTGCATTCAATGCCGGTCCAAGGATATGTTTGGGGAAGGATTTGGCTTACCTTCAGATGAAATCCATTGCTGCGGCGGTACTGCTCCGGCATCGCCTTGTGCTGTTGCCTGGCCACCAGGTGGAGCAAAAGATGTCACTCACGTTGTTCATGAAAAATGGGCTCAAGGTTAATGTGCACGAGAGGGATTTGAGAGGGGTCATCACAagtatacaaaaagaaaatgaaggagatGTTGGTTTTAGAAGTAATGAAAGTTAG | 1599 | 0.5034 | METCTALLLLTAITAYLIWFTFISRSLKGPRVWALLGSLPGLIDNCDRMHDWICDNLRACGGTYQTCICAIPFLAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWHAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAINQLCLILKKAKDQTEPVDLQDLMLRLTFDNICGLAFGRDPQTCVLGLPDNRFATAFDRATEASLQRFILPEVLWKLKKWLRLGMEVSLSRSLVQVDEHLSSVIEKRKVELLSQQKDGTLHDDLLTRFMKKKESYSDKFLQHVALNFILAGRDTSSVAMCWFFWLVIQNPKVEEKILREICTVLIETRGDNVTRWLDEPLAFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSAGRLKSTWGEDCMEFRPERWLSLDGTKFIMHDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLVLLPGHQVEQKMSLTLFMKNGLKVNVHERDLRGVITSIQKENEGDVGFRSNES | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu4g2802 | 532 | Pfam | Cytochrome P450 | 81 | 498 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506|GO:0016705 | |
| Ssu4g2802 | 532 | PRINTS | E-class P450 group I signature | 366 | 384 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | PRINTS | E-class P450 group I signature | 456 | 479 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | PRINTS | E-class P450 group I signature | 446 | 456 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | PRINTS | P450 superfamily signature | 447 | 456 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | PRINTS | P450 superfamily signature | 456 | 467 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | Gene3D | Cytochrome P450 | 24 | 511 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | PANTHER | CYTOCHROME P450 86A7 | 4 | 510 | - | - | |
| Ssu4g2802 | 532 | SUPERFAMILY | Cytochrome P450 | 21 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Ssu4g2802 | 532 | PANTHER | CYTOCHROME P450 | 4 | 510 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu4g2802 | Ssu-Chr4 | 71461391 | 71462989 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ssu4g2802 | 1 | 519 | Cytochrome P450 | AT2G45970 | 78.119 | 0.0 | 859 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu4g2802 | K15398 | - | gmx:100779986 | 1025.39 |
Event-related genes