Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2711 ATGTCGGCAGAAACAACCCGTGCGATTGTTGGACACGGCGGGGTTCGGCCATTGATTGAGCTTTGTCAAAGTTGTGATTCTGTGTCACAGGCTGCTGCTGCCTTTACTTTGACGAATGTATCAGCTGTTCCTGAGGTGAGACAGGCCTTGGCTGACAAAGGTATTGAGAGGGTTATGATCAATCTTCTCAATTGTGGAATTTTATTAGGTTCCAAAGAGTATGCAGCAGAGTGCTTGCAGAATCTCACAACAAGCAATGAGAATCTGAGAAGGTCTGTTATATTAGAAGGTGTTAGGAATCTTCTGGCCTATCTTGATGGTCCACTTCCCCAGGAATCTGCAGTTGGAGCATTGAGGAATCTGGTTGGATCAGTTTCCGAGGAAACTTTGGTTTCTCTTGGTTTGCTTCCCCGTTTGGTTCATGTGCTGAAGTCCGGATCGTTGGGTGCTCAACAAGCCGCCGCGTCTGTCATCTGCCGTGTCTGTAGCTCAATGGAGATGAAAAAAATGGTTGGAGAAGCAGGGTGCATCCCTCTTCTTATAGCTAAAGCAAATACGGCTAGAGAGGTTGCTGGTCAAGCAATTTCAAGCCCAATGGTTCTGTCTCAAAATAGGAGAGAAGTTAAGAAAGATGATAAAAGTGTGCCAAACCTGGTCCAGTTGCTTGATCCAAGCCCTCAGAACACTGCAAAAAAGTATGCAGTTTCTTGCCTTGGATCACTTTCTCCAGGTAAGAAATGTAAGAAACTGATGATTTCGTATGGAGCAATCGGGTATCTGAAAAAGCTTACGGAGATGGACATTCCAGGAGCTACAAAGCTACTTGAGCGGTTGGAAAGAGGGAAATTGAGAAGCTTGTTCAGCAGAAAGTAG 873 0.4536 MSAETTRAIVGHGGVRPLIELCQSCDSVSQAAAAFTLTNVSAVPEVRQALADKGIERVMINLLNCGILLGSKEYAAECLQNLTTSNENLRRSVILEGVRNLLAYLDGPLPQESAVGALRNLVGSVSEETLVSLGLLPRLVHVLKSGSLGAQQAAASVICRVCSSMEMKKMVGEAGCIPLLIAKANTAREVAGQAISSPMVLSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSPGKKCKKLMISYGAIGYLKKLTEMDIPGATKLLERLERGKLRSLFSRK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2711 290 Gene3D - 68 278 IPR011989 -
Ssu4g2711 290 Gene3D - 1 67 IPR011989 -
Ssu4g2711 290 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 290 - -
Ssu4g2711 290 SMART arm_5 124 163 IPR000225 GO:0005515
Ssu4g2711 290 SMART arm_5 2 42 IPR000225 GO:0005515
Ssu4g2711 290 SMART arm_5 85 123 IPR000225 GO:0005515
Ssu4g2711 290 SMART arm_5 43 84 IPR000225 GO:0005515
Ssu4g2711 290 SMART arm_5 201 243 IPR000225 GO:0005515
Ssu4g2711 290 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 290 - -
Ssu4g2711 290 SUPERFAMILY ARM repeat 4 268 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2711 Ssu-Chr4 68808126 68808998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2711 9 209 U-box Gene Family AT3G54790 27.670 2.59e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2711 - - gmx:100809488 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2711 4 68808126 68808998 Ssu4g2711 4 68808126 68808998 ECH