Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2690 ATGTTAGCAGTTATTGGCATCCTTCATCCCCCATATCTTTTTCTTTCGTGTTCCTGTGCTAAATCCAACATAGGTTTGGACCTCTACCTCCATTCTCTATGTCCCTGCTTATTCATAGCCACGAGTCTTGGAGTAAACACTTACTTCCTATGCAACATGATCTCCAGGACACTCCTACTATTCGTGGTCTTTATGGTGACAAATTCAGTCGCTCTCATGGACAAGCAGACATACATAATACACGTGGACAAGACCAAGATCAAAGCCTCAGTCCATTCCCAAGACAACACAAAAACTTGGTTCAAATCAGTCATTGATTTCATCTCTGAAGCTTCatttgaagaagaagagatagCCCCTCAGCTTCTTTATGTTTATGAAACCAGCCTGTTTGGTTTTGCTGCCCAACTTTCAAATAAACAGCTTGGGTACTTGAACCAAGTGGATGGTTTCCTTTCAGCCATACCTGATGAACTATTAACCCTTCACACAACATACAGCCCCCATTTTCTTGGCCTACAGAATGGAAGAGGACTTTGGAGTGCTTCTAACTTGGCCTCAAATGTGATCATAGGTGTCCTTGATACGGGAATATGGCCTGAACATATCAGTTTCCGAGACACAGGTTTGTCCAAAGTACCCTCTCGTTGGAAAGGTGCTTGTGAAGCAGGCACGAACTTCTCTACCTCAAATTGTAACAGGAAGCTTGTTGGTGCAAGAGTCTTTCTACAAGGGTATGAAAAATTTGCTGGAAGAATCAATGAAACATTGGATTATCGTTCTGCTAGAGATGCTCAAGGACATGGCACACACACAGCCTCAACTGCAGCTGGTAACATGGTAAGTAATGCCAGCGTTTTTGCCTTGGCCGGAGGTTCGGCCAGTGGAATGAGGTACACCTCAAGAATAGCTGCTTATAAAGTATGCTGGCGTTTAGGCTGTGCTAACTCTGACATATTGGCAGCTATTGATCAAGCTGTTGCTGATGGTGTTGATGTATTGTCACTCTCTTTAGGTGGCATTGCCAGACCTTATTACAATGATAGCATTGCAATAGCCTCATTTGGAGCAACACAACATGgagtttttgtttcttgttctGCAGGCAATTCAGGCCCCTCTACATCAACTGTTGGAAATGTTGCCCCATGGATCATGACTGTTGGTGCTAGCTACACTGACAGGAGCTTTCCAACACAAGTGAAGCTTGGGAATGGACAGGTTTTCAAAGGGTCATCATTATACAAGGGCAAGCAAACAAACCAATTGCCTCTTGTATATGGAAACTTCTCAAAAGCACAAAGGACAGCACAGTATTGCACCAAAGGTTCACTTGATCCAAAGTTTGTCAAAGGAAAAATAGTTGCCTGCGAACGCGGAATAAATAGTAGAACTGGAAAGGGAGAGGAAGTGAAGATGGCAGGTGGGGCAGGAATGATATTACTCAACTCAGAAAACCAAGGGGAAGAGCTCTTTGCTGACCCTCATCTTTTGCCAGCCACATCCTTAGGGTCCTCAGCAAGTAAAACAATTAGAAGCTACATTCGCTCAGCAAAAGCACCAACAGCTTCAATTTCCTTCCTAGGGACAACATATGGAGACCCTGCACCAGTTATGGCAGCATTTTCTTCCAGGGGACCAAGTGCAGTGGGACCAGATGTGATCAAGCCAGATGTAACTGCACCTGGTGTGAACATCTTGGCTGCTTGGCCTCCGACAACTAGCCCAAGCATGCTCAAGAGTGACAAAAGAAGTGTACTATTTAACATAGTCTCAGGTACCTCAATGTCATGTCCTCATGTTAGTGGCATAGCTGCATTGATTAAATCTGTGCACAAGGATTGGTCACCTGCAGCTATCAAATCTGCTCTGATGACTACTGCTTCCACATCAAACAACAAAGGTGCTCCAATTGCTGACAATGGTTCAAACAGTTCATCATTTGCTGAGCCCTTTGCTTTTGGTTCAGGCCATGTTAACCCTGAAAGAGCTTCTGATCCAGGCTTAGTCTATGACATCGCCACCAAAGATTACTTAAGTTACTTGTGCAGCCTGAAATACACATCCTCCCAGATTGCTTTATTGTCAAAAGGTAATTTTAAATGTGCCAAAAATTCAGGTCGTCAGGCTGGTGACTTGAACTACCCTTCATTTGCTGTGCTATTTGGCACAAGTGCTCTAAATGCTAGTGTGACATACAAGAGGGTAGTCACAAATGTAGGGAACGCCACAAGTTCTTATGCGGTGAAAGTGGAAGAACCAAAGGGAGTATCAGTTATGGTTGAACCTAGGAATATGAGTTTCAGAAAAATTGGCGAGAAATTGAGTTATAAAGTGACTTTTGTTTCATATGGGAAAACAGCAGTTACTGGCAGTTCATCATTTGGATCACTTACTTGGGTGTCAGGTAAATATGCCGCTAGAAGTCCTATAGCAGTAACATGGCAATAA 2451 0.4296 MLAVIGILHPPYLFLSCSCAKSNIGLDLYLHSLCPCLFIATSLGVNTYFLCNMISRTLLLFVVFMVTNSVALMDKQTYIIHVDKTKIKASVHSQDNTKTWFKSVIDFISEASFEEEEIAPQLLYVYETSLFGFAAQLSNKQLGYLNQVDGFLSAIPDELLTLHTTYSPHFLGLQNGRGLWSASNLASNVIIGVLDTGIWPEHISFRDTGLSKVPSRWKGACEAGTNFSTSNCNRKLVGARVFLQGYEKFAGRINETLDYRSARDAQGHGTHTASTAAGNMVSNASVFALAGGSASGMRYTSRIAAYKVCWRLGCANSDILAAIDQAVADGVDVLSLSLGGIARPYYNDSIAIASFGATQHGVFVSCSAGNSGPSTSTVGNVAPWIMTVGASYTDRSFPTQVKLGNGQVFKGSSLYKGKQTNQLPLVYGNFSKAQRTAQYCTKGSLDPKFVKGKIVACERGINSRTGKGEEVKMAGGAGMILLNSENQGEELFADPHLLPATSLGSSASKTIRSYIRSAKAPTASISFLGTTYGDPAPVMAAFSSRGPSAVGPDVIKPDVTAPGVNILAAWPPTTSPSMLKSDKRSVLFNIVSGTSMSCPHVSGIAALIKSVHKDWSPAAIKSALMTTASTSNNKGAPIADNGSNSSSFAEPFAFGSGHVNPERASDPGLVYDIATKDYLSYLCSLKYTSSQIALLSKGNFKCAKNSGRQAGDLNYPSFAVLFGTSALNASVTYKRVVTNVGNATSSYAVKVEEPKGVSVMVEPRNMSFRKIGEKLSYKVTFVSYGKTAVTGSSSFGSLTWVSGKYAARSPIAVTWQ 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2690 816 ProSitePatterns Serine proteases, subtilase family, serine active site. 593 603 IPR023828 -
Ssu4g2690 816 Pfam Subtilase family 187 636 IPR000209 GO:0006508|GO:0008236
Ssu4g2690 816 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 67 816 IPR045051 -
Ssu4g2690 816 CDD Peptidases_S8_3 160 629 IPR034197 -
Ssu4g2690 816 Pfam Fibronectin type-III domain 712 813 IPR041469 -
Ssu4g2690 816 Pfam PA domain 424 509 IPR003137 -
Ssu4g2690 816 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 65 163 IPR037045 -
Ssu4g2690 816 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 191 202 IPR023827 -
Ssu4g2690 816 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 67 816 - -
Ssu4g2690 816 Gene3D - 394 532 - -
Ssu4g2690 816 CDD PA_subtilisin_like 401 525 - -
Ssu4g2690 816 Pfam Peptidase inhibitor I9 77 163 IPR010259 -
Ssu4g2690 816 Gene3D Peptidase S8/S53 domain 188 678 IPR036852 GO:0004252|GO:0006508
Ssu4g2690 816 SUPERFAMILY Subtilisin-like 162 669 IPR036852 GO:0004252|GO:0006508
Ssu4g2690 816 PRINTS Subtilisin serine protease family (S8) signature 264 277 IPR015500 -
Ssu4g2690 816 PRINTS Subtilisin serine protease family (S8) signature 186 205 IPR015500 -
Ssu4g2690 816 PRINTS Subtilisin serine protease family (S8) signature 592 608 IPR015500 -
Ssu4g2690 816 ProSiteProfiles Serine proteases, subtilase domain profile. 165 665 - -
Ssu4g2690 816 Gene3D - 682 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2690 Ssu-Chr4 68375660 68378462 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2690 75 816 Subtilisin-like Serine Gene Family AT1G01900 57.392 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2690 - - gmx:100817581 1389.4