Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2684 ATGGATGAAGTGGTTTCGGTATTTCCAAATCAGTACCGAAAGCTACACACAACTAGATCATGGGACTTTATTGGGTTACCTTTGACTGCTAAGAGAAAACTGAAATTGGAGAGTGACATAATTGTGGCTCTTTTGGATACAGGAGCCAAATACTTCAAGATTGATGGAAAGCCTGATCCATCTGACATATTATCCCCAATAGATATGGTTGGTCATGGAACTCATACTGCATCAACAGCAGCAGGCAATCTTGTCCCAAATGCAAGTCTCTTTGGTATAGCCAAAGGGACTGCTCGCGGCACGGTGCCGTCAGCCAGGTTGGCAATTTACAAAGTCTGCTGGGCAAGAGATGGATGTGCAGACATGGATATACTTGCTGCTTTTGAAGCTGCTATACATGATGGTGTGGATGTCATATCCATTTCCATAGGTGGAGGGGATGCAAATTATGTGCAGGACTCTATAGGAATTGGAGCATTTCATGCCATAAGGAAAGGCATAATCACTGTGGCCTCAGCTGGAAATGATGGACCATTTACGGCAACTGTCACAAATAATGCGCCATGGATTGTAACGGTGGCAGCTAGTGGCATTGATAGGGATTTCCGGAGCACTATTGAGTTGGGGAGTGGAAAGAATGTTTCTGGGGCAGGAGTGAGCAGCTTCAATCCAAAACAAAAACTGTACCCCCTTGTTAATGGGATTGATGCGGCCCGAAACTCCGAGGGCAAGGAAGATGCTAaATTCTGCTTTGAAGACTCCTTGGAGCCAAATAAGGTGAAAGGAAAACTTGTATACTGTAGATTAGGAACCTGGGGCACTGAAGCTGTTGTGAAAGCAATTGGAGGCATTGGTACTATAATTGAAAGTGATCAATTTCTTGAAGTTGCCCAAATATTCATGGCTCCGGCTACCGTTGTGAATAGTAGCATAGGTCAAATTATTACCAATTATACACAGTCCAAAAGATCACCATCAGCAGTAATACATAAGAGCCATGAAGTAAAAATATCAGCTCCATTTACGGCTTCATTTTCATCTAGGGGTCCAAATCCAGGATCTCAACATATTCTCAAGCCTGATGTTACAGCTCCTGGCATTAACATTTTGGCATCTTATACACCTATGAAGTCAATTACTGGTTTGAAAGGGGATACCCAATTTTCAGAATTTACATTGATGTCTGGAACTTCTATGTCATGCCCTCATGTTTCTGGAGTAGCAGCATATGTGAAGTCATTTCACCCAGATTGGACTCCTGCAGCAATCAGATCAGCCATTATTACAACAGCTAAACCTATGAGCCAGGGAGTTAACAAGGAGGCAGAATTTGCATATGGTGCTGGTCAAGTGAATCCTACAAGAGCTGTGAACCCAGGTTTAGTCTATGACATGGATGACTTTGCATATATCCAGTTCTTATGCCATGAGGGCTATAATGGTTCCACTCTATCAGTGTTAGTTGGCTCTCCTGTGAACTGCACCTCTTTGCTTCCTGGGCTTGGTTATGATGCTGTCAACTATCCCAGCATGCAACTAAGTGTGAAAAACAACACAGGCACAACAGTAGGAGTTTTCAGGAGAAGAGTGACGAATGTTGGTCCTGCTCCAACCATCTTCAATGCCACCATCAAATCTCCCAAAGGGGTGGAAATCACAGTGAAGCCTACAAGCCTCATTTTCTCCCACACCCTGCAGAAGAAGAGCTTCAAGGTAGTGGTGAAAGCGAAATCTATGGCAAGCATGCAAATTGTATCAGGTTCACTTATTTGGAGAAGCCCACGTTACATTGTTAGGAGCCCCATTGTTATATATAGCCCATAA 1824 0.4348 MDEVVSVFPNQYRKLHTTRSWDFIGLPLTAKRKLKLESDIIVALLDTGAKYFKIDGKPDPSDILSPIDMVGHGTHTASTAAGNLVPNASLFGIAKGTARGTVPSARLAIYKVCWARDGCADMDILAAFEAAIHDGVDVISISIGGGDANYVQDSIGIGAFHAIRKGIITVASAGNDGPFTATVTNNAPWIVTVAASGIDRDFRSTIELGSGKNVSGAGVSSFNPKQKLYPLVNGIDAARNSEGKEDAKFCFEDSLEPNKVKGKLVYCRLGTWGTEAVVKAIGGIGTIIESDQFLEVAQIFMAPATVVNSSIGQIITNYTQSKRSPSAVIHKSHEVKISAPFTASFSSRGPNPGSQHILKPDVTAPGINILASYTPMKSITGLKGDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPDWTPAAIRSAIITTAKPMSQGVNKEAEFAYGAGQVNPTRAVNPGLVYDMDDFAYIQFLCHEGYNGSTLSVLVGSPVNCTSLLPGLGYDAVNYPSMQLSVKNNTGTTVGVFRRRVTNVGPAPTIFNATIKSPKGVEITVKPTSLIFSHTLQKKSFKVVVKAKSMASMQIVSGSLIWRSPRYIVRSPIVIYSP 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2684 607 Gene3D - 199 335 - -
Ssu4g2684 607 PRINTS Subtilisin serine protease family (S8) signature 68 81 IPR015500 -
Ssu4g2684 607 PRINTS Subtilisin serine protease family (S8) signature 37 56 IPR015500 -
Ssu4g2684 607 PRINTS Subtilisin serine protease family (S8) signature 395 411 IPR015500 -
Ssu4g2684 607 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 2 48 - -
Ssu4g2684 607 ProSitePatterns Serine proteases, subtilase family, serine active site. 396 406 IPR023828 -
Ssu4g2684 607 Gene3D Peptidase S8/S53 domain 48 467 IPR036852 GO:0004252|GO:0006508
Ssu4g2684 607 ProSiteProfiles Serine proteases, subtilase domain profile. 20 457 - -
Ssu4g2684 607 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 48 605 - -
Ssu4g2684 607 Gene3D - 474 606 - -
Ssu4g2684 607 Pfam Subtilase family 66 449 IPR000209 GO:0006508|GO:0008236
Ssu4g2684 607 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 48 605 IPR045051 -
Ssu4g2684 607 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 48 IPR045051 -
Ssu4g2684 607 CDD Peptidases_S8_3 14 431 IPR034197 -
Ssu4g2684 607 SUPERFAMILY Subtilisin-like 15 461 IPR036852 GO:0004252|GO:0006508
Ssu4g2684 607 Pfam Fibronectin type-III domain 506 604 IPR041469 -
Ssu4g2684 607 CDD PA_subtilisin_like 205 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2684 Ssu-Chr4 68245841 68250038 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2684 1 445 Subtilisin-like Serine Gene Family AT4G00230 62.397 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2684 - - ccaj:109800351 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2684 4 68245841 68250038 Ssu3g0847 3 20627636 20635845 PCT