Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2660 ATGGGTGTTTTTGAGAGTGTTGATAGTGGGAATGTGAGGAAGAAGGGCGGCGGTGGTTCGGGGAGGGATTGGTGGTGGAAGCAGGAGAGTGGGGGAGGTGGGGAATCGGGGAGGGTGAAGGATTATGTGATGGAGTGGATCGGGAGTGAGATAAAGAAGGAGAGGCCCAAGAGTGAGTGGGTTCATTcgtgttcttcttcttctcctaaggtggagaatgagaatgagaatgagaagaagaataagaagaagaagaagaatgagaaGAAGCAGAGGAGGAGGTTGGATTGGTGGGCCTCACTTGATGAGGAGAGGGTTGGTGTGAAGGTGAAGGTGAAGGTGGTGAGTAAGAAGAGTAGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTTTGCGAGGAGTTGTCGAAGAAGAgtaggaagaagaagaggggtGTGGAGTGGTGGCAGAGGGAGGAGGAAGGGGTGGAgcagaagaggaagaggaagagtaAGGGGAGTATTGATTGGTGGTTGGACGGTTTGGGTGGGGAGAGTGAGAtgaggaataataataataatgggagGAGGAATAGCCAGGATTGGGTTAGTGGGGATGTGCCGAAGAGTGGTGGGATTAGTAGCACTCCCAGCATGAGAGGGACTGTGTGTTACATTGCTCCTGAGTATGGTGGTGGGGGGCAGTTGTCTGAGAAGTGCGATGTGTATAGTTTTGGGGTTCTGCTTTTGGTTCTGGTGGCCGGGAGGCGGCCGCTGCAGGTGACCGCCTCGCCAATTTCCGAGTTTGAGAGGGCCAATTTGATTTCCTGGGCCAGGCAGCTTGCTCACAATGGGAGGCTCTTGGACCTTGTTGACACTTCTATTCATTCCTTGGATAAGGAGCAGGCGCTGCTCTGCATCACCATTGCCTTGTTGTGTTTGCAGAGGTCACCGGCAAGAGGCCTTCCATGA 948 0.462 MGVFESVDSGNVRKKGGGGSGRDWWWKQESGGGGESGRVKDYVMEWIGSEIKKERPKSEWVHSCSSSSPKVENENENEKKNKKKKKNEKKQRRRLDWWASLDEERVGVKVKVKVVSKKSRKPREWWKEEFCEELSKKSRKKKRGVEWWQREEEGVEQKRKRKSKGSIDWWLDGLGGESEMRNNNNNGRRNSQDWVSGDVPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCITIALLCLQRSPARGLP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2660 315 MobiDBLite consensus disorder prediction 53 93 - -
Ssu4g2660 315 SUPERFAMILY Protein kinase-like (PK-like) 207 311 IPR011009 -
Ssu4g2660 315 Coils Coil 68 95 - -
Ssu4g2660 315 Gene3D Transferase(Phosphotransferase) domain 1 185 312 - -
Ssu4g2660 315 MobiDBLite consensus disorder prediction 1 38 - -
Ssu4g2660 315 PANTHER OS07G0586332 PROTEIN 10 312 IPR044576 -
Ssu4g2660 315 MobiDBLite consensus disorder prediction 178 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2660 Ssu-Chr4 67767496 67768443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2660 211 311 Receptor kinase-like Gene Family AT1G07650 41.176 2.11e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Ssu4g2660 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2660 - - gmx:100814933 484.567