Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2659 ATGCCATCGCGTCCGCCGCCGCCTTCCCCTCCCGCGGCGGCCTCCCACCACCGCGGCGAGATAATCCTCTGCGGCGCCGTGGCTGGCTTGCTCCTCCTCGCGGCGCTGATAGTCTCCGTGACGATCTTCCTGTACCGCAAGCTCTCCTACAACCGAACAGCGCCGTTCGAGCACAGCCAGCGGCGGTTCTCGTACTCCGTCCTCCGCCGCGCGACGAGCTCGTTCTCGCCCTCCACGAAGCTCGGCCACGGAGGGTTCGGTTCGGTCCACAAGGCGACGCTTCCGTCGGGCCAGGCCGTGGCGCTGAAGGTGATGGACTCGCCCGGCTCGCTCCAGGGAGAGAGGGAGTTCCACAACGAGCTGGCGCTGTGTTCGAATCTCAGGTCCCCGTTCATCATCTCGCTTCTCGGCTTTTCGTCGGACCGGCGCGGTCGGAAGCTGGTCCTGGTCTACGAGCTGATGCCGAACCGGAGCCTGCAGGACGCGCTTCTGGACAGGCGGTGTCCGGAGCTGATGGGCTGGGGGAAGCGGTTCGACGTCGCCGTTTCGGTGGCGATGGGTTTGGAGTACTTGCATCACGCGTGCGACCCGCCCGTGATCCACGGGGACATCAAGCCCAGTAATGTCTTGCTGGACCGGGAGTTTCGGGCCAAGATTGGGGATTTTGGGCTCGCTAGGGTTAAGACGGTGGAGGATCTGGGAATGGAGATGGTGGACGAggatgagaagaagaagaaggaaggggTTGAGGTTGAGGAGTTTGGTGTTTTGGAGGAGGGAGAGAGTGTGGTGGACGTTGAGCGTTCGCCGGAGAGTTGTCCGGTGAGGGCTGTGGATTATTCCGACGCGTCGCCGGCGGGGGGGTGA 867 0.624 MPSRPPPPSPPAAASHHRGEIILCGAVAGLLLLAALIVSVTIFLYRKLSYNRTAPFEHSQRRFSYSVLRRATSSFSPSTKLGHGGFGSVHKATLPSGQAVALKVMDSPGSLQGEREFHNELALCSNLRSPFIISLLGFSSDRRGRKLVLVYELMPNRSLQDALLDRRCPELMGWGKRFDVAVSVAMGLEYLHHACDPPVIHGDIKPSNVLLDREFRAKIGDFGLARVKTVEDLGMEMVDEDEKKKKEGVEVEEFGVLEEGESVVDVERSPESCPVRAVDYSDASPAGG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2659 288 SUPERFAMILY Protein kinase-like (PK-like) 50 232 IPR011009 -
Ssu4g2659 288 Gene3D Transferase(Phosphotransferase) domain 1 154 249 - -
Ssu4g2659 288 PANTHER OS07G0586332 PROTEIN 1 268 IPR044576 -
Ssu4g2659 288 Pfam Protein kinase domain 78 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g2659 288 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
Ssu4g2659 288 Gene3D Phosphorylase Kinase; domain 1 39 153 - -
Ssu4g2659 288 ProSiteProfiles Protein kinase domain profile. 75 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g2659 288 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Ssu4g2659 288 SMART serkin_6 75 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g2659 288 PANTHER OS07G0586332 PROTEIN 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2659 Ssu-Chr4 67766609 67767475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2659 57 227 Receptor kinase-like Gene Family AT3G58690 48.000 1.18e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Ssu4g2659 Pkinase 1.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2659 - - gmx:100814933 432.565