Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2650 ATGCATGCAAGTACTCGTGACATgacaacaaaattttacaaaaccaAGACTGCGTCACTTAAACCAAACCCTCTTCAACCTTCAATTCGCTTTCgatctttcttccttttctctcaacaacaAACAATGTCGGAACCTCAAAACCCTCCTTCCTCCTCCATCGACCCTTTCGAATTCCTCAAAATCAAACTCAACGCCGACGGCCGTTCCCTCACCCGAAACTACGTCGTTCCAACCGTCCCCCCCTCCCCGGACCCCACCCACGATTCTCCGCCGCAACCCGCTCTCTCCAAAGATGTTCCGCTCAACCCCGCCGCCGCCACCTCCCTCCGCCTCTTCCTCCCCCGCCCTCCGCCGGCCCCCCCCGCCGCCAAGCTCCCCCTCCTCCTCTACTTCCACGGCGGCGGCTTCATCCTCTACCACCCCTCCTCCCTCATCTTCCACCACTCCTGCGCGGCCCTCGCCGCCGCCCTCCCCGCCGTCGTCGCCTCCGTCGACTACCGCCTCTGCCCCGAACATCGCCTCCCCGCCGCCTACGACGACGCCCTCGACGCCCTCCTCTGGGCCCGGGCGCAGGCCCGCGACCCGGCCCAAGCCGACCCCTGGCTCCGCGACCACGTCGACTTCTCCAAAACCTTCCTCATGGGAAGCAGCGCCGGGGGAAACATCGCCTGCTTCGCGGGCCTGCGTGCGCTCGACCTCGATCTTTCTCCCCTTAAAATCCTCGGCATCGTAGTGAACGCCCCCTACTTCGGTGGGACCCAGCGGTCAAACTCCGAACTCCGTCTGGTCAACGATCGCATCCTGCCGCTGCCCGCGAACGATTTAATGTGGTCGCTGTCTTTGCCCGAGGGCGCGGATCGCGACCACGTGTACTGCAATCCGACGGTCGCGGACACGGTCCACGCGGACAAGATCGGACGGTTGCCGAGGTGCTTCATCAACGGCTACGGTGGGGACCCCTTGGTGGACAAGCAGAAGGAGTTGGCGGGGATTTTGGAGGCGCGTGGGGTGCACGTGGAGGCGCATTTCGCCGACGATGGGTATCATGCTGTGGAGATCTTCGACCCAGCGAAGGCACTTGCTTTGTGTGATAACATCAAGAAATTTATACTCTCCGCTACTACTCAATCCTCCATGTGA 1143 0.5984 MHASTRDMTTKFYKTKTASLKPNPLQPSIRFRSFFLFSQQQTMSEPQNPPSSSIDPFEFLKIKLNADGRSLTRNYVVPTVPPSPDPTHDSPPQPALSKDVPLNPAAATSLRLFLPRPPPAPPAAKLPLLLYFHGGGFILYHPSSLIFHHSCAALAAALPAVVASVDYRLCPEHRLPAAYDDALDALLWARAQARDPAQADPWLRDHVDFSKTFLMGSSAGGNIACFAGLRALDLDLSPLKILGIVVNAPYFGGTQRSNSELRLVNDRILPLPANDLMWSLSLPEGADRDHVYCNPTVADTVHADKIGRLPRCFINGYGGDPLVDKQKELAGILEARGVHVEAHFADDGYHAVEIFDPAKALALCDNIKKFILSATTQSSM 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2650 380 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN 50 372 - -
Ssu4g2650 380 MobiDBLite consensus disorder prediction 73 101 - -
Ssu4g2650 380 SUPERFAMILY alpha/beta-Hydrolases 78 357 IPR029058 -
Ssu4g2650 380 Pfam alpha/beta hydrolase fold 129 352 IPR013094 GO:0016787
Ssu4g2650 380 PANTHER ARYLACETAMIDE DEACETYLASE 50 372 - -
Ssu4g2650 380 Gene3D alpha/beta hydrolase 57 378 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2650 Ssu-Chr4 67448073 67449215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2650 48 330 Carbohydrate Esterase AT1G68620 35.739 1.26e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2650 - - aprc:113850489 500.36