Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2642 ATGACTGATCTTGCAGGTAAGTACAAGACATACAGGTTGCTCAACCCTTTCAGATATGAGATTTACACTGCAGAGCCATGTAATGTTGAGTATATActcaaaaccaattttgagaATTATGGAAAGGTAGATACTTCATTAATGGAtgaattattcatttatttgGGCTTGTACAACTACCACAATTTGAAGGATTTACTAGGTGATGGTATTTTCACTGTTGACGGCAAAAAATGGCGTGAGCAAAGGAAGATATCAAGTCATGAATTCTCCACCAAGATGTTAAGAGACTTCAGCATTTCAATATTCAGAAAGAATGCAGCAAAACTTGCAAACATAGTGTCTGAAGTGGCAACTTCTAACAATACGTTGGAAATCCAAGACCTTTTCATGAAATCAACAATGGATTCAATTTTCCAAGTTGCATTTGCAACTGAACTTGACAGCTTGTGTGGATCAAGTCAAGAAGGGAAGATTTTTGCTGATGCTTTTGATGCTTCCAGTGCACTGACCCTTTATCGTTATGTTGATGTCTTCTGGAAGATAAAGAAATTTCTGAATATTGGATCGGAGGCCAAATTAAGAAAgactactaaaattttaaatgaatttatttttaagctaatcAACACTAGAATTCAGCAAATGCAGATTTCAAAGGAAGATTCTGATAGTAAACGAGAAGATATTCTGTCAAGGTTTCTGCCAGTGGAAGGATATGATTCAACATACTTGCGAGATATAATTCTAAACTTTGTTATTGCTGGGAAAGACACAACAGCTGCCACGCTTGCTTGGTTCATGTACATGCTATGTAAGTATCCTGCAGTTCAAGAAAAAGCAGCAGAAGAAGTGAAAGAAgcaacaaacacaaaaacaattaGAAGCTATACTGACTTTGTGTCTAGTGTCACGGATGAAGTTCTTAAAAAGATGAACTATCTCCATGCAGCAATTACTGAAACTCTCAGACTTTATCCTGCAGTTCCTGTGGATGCAAAGATTTGTTTTTCTGATGATACATTACCGGATGGATATAGTGTAAATAAAGGAGATATGGTATGTTACCAACCTTATGCAATGGGtcatatgaaatttatatgggGTAATGATGCAGAGGATTTTAGACCAGAAAGATGGCTTGATGAGAATGGCATTTTTAAGCCAGAGAACCCTTTCAAGTTTACAGCTTTTCAGAAATTCAACAATTTGGAATTGGATGCCCACAACCACTGTGCTCTTCATCTTCAGAGCACAGTGTAG 1263 0.3436 MTDLAGKYKTYRLLNPFRYEIYTAEPCNVEYILKTNFENYGKVDTSLMDELFIYLGLYNYHNLKDLLGDGIFTVDGKKWREQRKISSHEFSTKMLRDFSISIFRKNAAKLANIVSEVATSNNTLEIQDLFMKSTMDSIFQVAFATELDSLCGSSQEGKIFADAFDASSALTLYRYVDVFWKIKKFLNIGSEAKLRKTTKILNEFIFKLINTRIQQMQISKEDSDSKREDILSRFLPVEGYDSTYLRDIILNFVIAGKDTTAATLAWFMYMLCKYPAVQEKAAEEVKEATNTKTIRSYTDFVSSVTDEVLKKMNYLHAAITETLRLYPAVPVDAKICFSDDTLPDGYSVNKGDMVCYQPYAMGHMKFIWGNDAEDFRPERWLDENGIFKPENPFKFTAFQKFNNLELDAHNHCALHLQSTV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2642 420 PRINTS E-class P450 group I signature 316 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2642 420 PRINTS E-class P450 group I signature 244 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2642 420 PRINTS E-class P450 group I signature 264 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2642 420 Pfam Cytochrome P450 63 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2642 420 PRINTS P450 superfamily signature 317 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2642 420 PRINTS P450 superfamily signature 255 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2642 420 SUPERFAMILY Cytochrome P450 9 398 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2642 420 PANTHER CYTOCHROME P450 1 400 - -
Ssu4g2642 420 Gene3D Cytochrome P450 1 400 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2642 420 PANTHER CYTOCHROME P450-RELATED 1 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2642 Ssu-Chr4 67154439 67160703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2642 2 399 Cytochrome P450 AT2G45510 51.485 2.23e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2642 - - gmx:100789049 689.108