Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2641 ATGTCCATCATGacttttctttcaaatccttaTTTCTTTGCACCTTTGTCTGCAGCTGTAACTCTTTTGCTGGTTCAAGTTCTGTTCAGAAAACTGAACAAAAGTCATAGAAAGAAGTACCACCCTGTTGCTGGCACTATGTTTCATCAGATGCTGAACTTCAACAGGCTGCACCATTATATGACTGATCTTGCAAGCAAGTACAGGACATACAGGTTGCTCACCCCTTTCAGATATGAGGTTTACACTGCAGAACCAGCAAATGTTGAGTATATACTCAAAACCAAATTTGAGAACTATGGAAAGGGTTTGTACAACTACCACAATTTGAAGGATTTACTAGGTGATGGTATTTTCACTGTTGACGGCGAAAAATGGCGTGAGCAAAGGAAGATATCAAGTCATGAATTCTCCACCAAGATGTTAAGAGACTTCAGCATTTCAATATTCAGAAAGAATGCAGCAAAACTTGCAAACATAGTGTCTGATGCTGCAACTTCTAACAATACATTGGAAATCCAAGACCTTTTAATGAAATCAACACTGGATTCAATTTTTCAAGTTGCATTTGGAGCTGAACTTGATAGCATGTGTGGATCAAGTCAAGAAGGGAAGATTTTTGCTGATGCTTTTGATACTTCAAGTGCACTAACCCTTTATCGTTATGTCGATGTCTTCTGGAAGATAAAGAAATTTCTGAATATTGGATCAGAGGCCAAATTAAGAAagaataccaaaattttaaatgaatttgtttttaagcTAATCAACACTAGAATTCAGAAAATGCAGATTTCAAAGGAAGATTCTGATAGTAAACGAGGAGATATTCTGTCAAGGTTTCTGCAAATGAAGGGATATGATTCAAAATACTTGAGAGATATAATTCTAAACTTTGTTATTGCCGGGAAAGACACAACGGCTACCACACTTGCTTGGTTCATGTACATGCTATGTAAGTATCCTGCAGTCCAAGAAAAAGCAGCAAAAGAAGTGAAAGAAgcaacaaacacaaaaacaattaGTAGCTATACTGACTTTGTGTCTAGTGTCACGGATGAAGCTCTTGAAAAGATGAACTACCTCCATGCAGCAATTACTGAAACTCTCAGACTTTATCCTGCAGTTCCTGTGGATGCAAAGATTTGTTTTTCTGATGATACGTTACCAGATGGGTATAGTATAAATAAAGGGGATCTGGTATCTTACCAACCTTATGCAATGGGTCGGATGAAATTTATATGGGGAAATGATGCAGAGTATTTTAGACCAGAAAGATGGCTTGATGAGAATGGCATTTTTAAGCCAGAGAGCCCTTTCAAGTTTACAGCTTTTCAGGCTGGTCCTCGGATTTGTCTAGGAAAGGAGTTTGCCTATAGACAGATGAAGATATTCTCAGCAGTTTTGTTAGGCAGTTTCCGCTTCAAATTGAATGATGAGAAGAAAAATGTCACCTACAAGACGATGATAAATCTTCATATTGATGGAGGTCTTGAAATCAAGGCCTTCCACAGATACAAGGATTAA 1527 0.3628 MSIMTFLSNPYFFAPLSAAVTLLLVQVLFRKLNKSHRKKYHPVAGTMFHQMLNFNRLHHYMTDLASKYRTYRLLTPFRYEVYTAEPANVEYILKTKFENYGKGLYNYHNLKDLLGDGIFTVDGEKWREQRKISSHEFSTKMLRDFSISIFRKNAAKLANIVSDAATSNNTLEIQDLLMKSTLDSIFQVAFGAELDSMCGSSQEGKIFADAFDTSSALTLYRYVDVFWKIKKFLNIGSEAKLRKNTKILNEFVFKLINTRIQKMQISKEDSDSKRGDILSRFLQMKGYDSKYLRDIILNFVIAGKDTTATTLAWFMYMLCKYPAVQEKAAKEVKEATNTKTISSYTDFVSSVTDEALEKMNYLHAAITETLRLYPAVPVDAKICFSDDTLPDGYSINKGDLVSYQPYAMGRMKFIWGNDAEYFRPERWLDENGIFKPESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGSFRFKLNDEKKNVTYKTMINLHIDGGLEIKAFHRYKD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2641 508 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 Gene3D Cytochrome P450 26 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 PANTHER CYTOCHROME P450-RELATED 18 506 - -
Ssu4g2641 508 SUPERFAMILY Cytochrome P450 39 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 Pfam Cytochrome P450 41 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2641 508 PANTHER CYTOCHROME P450 18 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2641 Ssu-Chr4 67123709 67128670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2641 38 505 Cytochrome P450 AT2G45510 54.008 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2641 - - gmx:100789049 917.916