Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2640 ATGGATGTTTTGTACACCCTGCTGAGTTTGATAGCCTTCTCTATTCTGGGtatcttccttgtcttttgttTCATCACGTTGACCATGATCCTCGGAAAATCAATAGGGGACCCTGATTATGCTCCTGTAAAAGGCACAGTGTTTAACCAGCTATTCTACTTCAACACACTCCATGACTACCATACTGAAGTGGCCAAAACTCATCCAACTTTTCGGCTACTGGCTCCAGATCAAAGTGAGTTGTACACGGTAGACCCGCAAAATGTTGAATACATGCTGAAAACCAACTTTGATAAGTACTCCAAAGGCAAGTATAACCAGGATATTATAACTGATCTTTTTGGTAAGGGGATTTTTGCTGTTGATGGTGACAAGTGGAGGCAGCAAAGGAAGCTTGCAAGTTATGAATTCTCCACAAGAGTTCTTAGAGATTTCAGTTGTTCTGTTTTTAGAAGGAATGCTGCCAAGTTGGTCAGGGTTATCTCAGAAATTTCCCATCAGGGTCAGGATTTTGATATGCAAGACATACTAATGAGATGCACTTTGGACTCCATATTCAAAGTTGGGTTTGGAACGGAATTGAATTGCTTAGAGGGATCAAGCAAAGAGGGAAGTGAATTCATGAAGGTCTTTGATGAGTCAAATGCTTTGATTTACTGGCGCTATGTTGATCCATTCTGGAGGCTCAAGAGGTTCCTTAAGATTGGTTGTGAAGCTACCCTTAAGAGAAACGTGAAAATAATAGATGATTTTGTCCATGGAGTAATTAAGACCAGAAAAGCACAATTGGCAATTCAGCAAGAATCTAATGTTAAAGAGGATATACTATCAAGGTTTTTGATTGAGAGCAAGAAGGACCAAAAAACTATGACTGATCAGTATTTGAGGGATATAATTCTGAACTTTATGATAGCTGGCAAGGACACGAGTGCAAACACTCTTTCATGGTTCTTCTACATGCTCTGCAAGAACCCTCTTATAGAGGAAAAGATTGCGCAAGAAGTGAGAGATGTCACTTGTAGCCATGAAAGTAAACCAAACATAGAAGAGTTTGTGGCTAAAATAACAGATGACACCATTGAAAAAATGCATTATCTTCATGCAGCATTGACAGAGACCTTGAGACTTTACCCTGCAGTCCCTATGGATGGGAGGACTGCAGAGACGCCTGATATTCTTCCAAATGGCCACAAACTGAAAAAGGGAGATGGAGTGTACTACTTGGCCTATGGTATGGGTCGGATGTCTTCCATTTGGGGTGAAGATGCTGAGGAATTTCGTCCTGAAAGATGGCTCAACAATGGAATTTTCCAACCTGAATCGCCATTCAAATTCGTAGCTTTCCATGCTGGACCTCGAATTTGCTTAGGGAAGGACTTTGCTTACAGACAGATGAAAATAGTAGCAATGGCTCTTCTTCGTTTCTTCAGGTTTAAATTGGCAAATGGAACCGAAAATGTGACTTATAGGGTCATGTTTACGCTTCACATGGACAAGGGCCTCCCTCTCTATGCAATTCCAAGGTCATGA 1530 0.4059 MDVLYTLLSLIAFSILGIFLVFCFITLTMILGKSIGDPDYAPVKGTVFNQLFYFNTLHDYHTEVAKTHPTFRLLAPDQSELYTVDPQNVEYMLKTNFDKYSKGKYNQDIITDLFGKGIFAVDGDKWRQQRKLASYEFSTRVLRDFSCSVFRRNAAKLVRVISEISHQGQDFDMQDILMRCTLDSIFKVGFGTELNCLEGSSKEGSEFMKVFDESNALIYWRYVDPFWRLKRFLKIGCEATLKRNVKIIDDFVHGVIKTRKAQLAIQQESNVKEDILSRFLIESKKDQKTMTDQYLRDIILNFMIAGKDTSANTLSWFFYMLCKNPLIEEKIAQEVRDVTCSHESKPNIEEFVAKITDDTIEKMHYLHAALTETLRLYPAVPMDGRTAETPDILPNGHKLKKGDGVYYLAYGMGRMSSIWGEDAEEFRPERWLNNGIFQPESPFKFVAFHAGPRICLGKDFAYRQMKIVAMALLRFFRFKLANGTENVTYRVMFTLHMDKGLPLYAIPRS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2640 509 Gene3D Cytochrome P450 34 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 PANTHER CYTOCHROME P450 6 508 - -
Ssu4g2640 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Ssu4g2640 509 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 Pfam Cytochrome P450 48 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2640 509 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 6 508 - -
Ssu4g2640 509 SUPERFAMILY Cytochrome P450 49 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2640 Ssu-Chr4 67099627 67104229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2640 7 509 Cytochrome P450 AT2G45510 62.130 0.0 681