Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2615 ATGGACCTAGATGCACGGAAAAGTGGAGATGGCAGCAATGCATCATTGCCGTCCAATCTTGTGCTCTATTCTTACTGCCACAGCTCTTGCTCTTGGCGTATCCGCTTTGCTTTATGCCTCAAAGGGATCCCATATGAGTACAAAGCAGTGGATCTTTTAAAAGGAGAGCAGTACAGTCCAGAATTCGAGAGATTGAATCCTCTGCACTACGTTCCAGTATTAGTTGATGATAATGTAGTGGTTTCAGACTCTTATGCAATATTTCTGCATTTGGAGGAAAAATATACTCAGAAGCCACTGTTGCCAGTTGATCCTCAGCTCAGAGCTCTCAATCTTCAGGTAGCAAGTATTATTCACTCCAGTATACAGCCTCTTCATATGCTTAATGTTCTGAAAGATATGGAGAAAATGTTTGGTGCAGAATCAAAACCGTGGGCCCAATTTACCATCGACAAAGGTTTCTTAGCTCTTGAAAAGATACTGAAGGATTTTGCTGGTACATATGCTACAGGGGAACATATCTATATGATTACACAGGCAGTTCAGAGGTTTGATATTGATATGTCCAAATTTCCTACCCTGAGTAGATTGTATGAAACATACAAAGCTTTGCCAGAGTTCCGGGCCTCATCACCACAAAGACAACCTGATGCCTACATTCATAACCCTTGA 672 0.4167 MDLDARKSGDGSNASLPSNLVLYSYCHSSCSWRIRFALCLKGIPYEYKAVDLLKGEQYSPEFERLNPLHYVPVLVDDNVVVSDSYAIFLHLEEKYTQKPLLPVDPQLRALNLQVASIIHSSIQPLHMLNVLKDMEKMFGAESKPWAQFTIDKGFLALEKILKDFAGTYATGEHIYMITQAVQRFDIDMSKFPTLSRLYETYKALPEFRASSPQRQPDAYIHNP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2615 223 SFLD Glutathione Transferase (cytosolic) 20 198 IPR040079 -
Ssu4g2615 223 TIGRFAM maiA: maleylacetoacetate isomerase 22 218 IPR005955 GO:0003824|GO:0005737|GO:0009072
Ssu4g2615 223 Gene3D - 101 219 - -
Ssu4g2615 223 SFLD Main (cytGST) 20 198 - -
Ssu4g2615 223 PANTHER MALEYLACETOACETATE ISOMERASE 10 219 - -
Ssu4g2615 223 Pfam Glutathione S-transferase, N-terminal domain 22 99 IPR004045 -
Ssu4g2615 223 SUPERFAMILY Thioredoxin-like 19 102 IPR036249 -
Ssu4g2615 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 99 IPR004045 -
Ssu4g2615 223 SUPERFAMILY GST C-terminal domain-like 99 219 IPR036282 -
Ssu4g2615 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 220 IPR010987 -
Ssu4g2615 223 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 10 219 - -
Ssu4g2615 223 Gene3D Glutaredoxin 22 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2615 Ssu-Chr4 66489268 66496387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2615 18 218 Glutathione S-transferase Gene Family AT2G02380 46.667 1.50e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2615 K01800 - gmx:100796296 403.675