Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2556 ATGATGTCACCACTTATGCTAGTTTTGTGCCTTACTCTCCCTGTGTTCTTGTTATTCTTCTTCCAATACAGCAGAATCTTCAAGAACCCACTCTGTCCACCGGGTCCTAGAGGCCTTCCCATAATAGGGAATCTCCATCAACTAGAAAACTCTATTCTTCATCTGCAGCTATGGCAACTCTCAAAGAAGTACGGGCCTCTACTTTTCCTTCAACTAGGTTTAAGGCCAGCCATAGTTATTTCCTCACCTAAAGTGGCCGAAGAGGCACTTAAAAACCTTGACCTTGAGTTTAGTGGACGACCAAAATTACTTGGCCAACAGAAACTGTCCTACAATGGAATAGACATATATCATTTTCCCCATACGGTCATTATTGGAGAGAAATCAGAAAACTTGGTGTTGTCCATGTCCTTAGCTCTAGACGTGTATCATGCTTTTCTTCAATAA 447 0.4183 MMSPLMLVLCLTLPVFLLFFFQYSRIFKNPLCPPGPRGLPIIGNLHQLENSILHLQLWQLSKKYGPLLFLQLGLRPAIVISSPKVAEEALKNLDLEFSGRPKLLGQQKLSYNGIDIYHFPHTVIIGEKSENLVLSMSLALDVYHAFLQ 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2556 148 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2556 148 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2556 148 Gene3D Cytochrome P450 27 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2556 148 PANTHER CYTOCHROME P450 71B11-RELATED 4 119 - -
Ssu4g2556 148 SUPERFAMILY Cytochrome P450 23 114 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2556 148 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 119 - -
Ssu4g2556 148 Pfam Cytochrome P450 33 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2556 Ssu-Chr4 64817643 64818089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2556 34 121 Cytochrome P450 AT3G26290 48.864 2.57e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2556 - - ccaj:109815551 177.178