Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2555 ATGATAAAAACAATATCTAGGCATGCCGCATCTTCCAAGGTTACAAACTCGAATGAAGCATTGTTATCTCTCACGTGTGCTATTATATGTAGAATTGCTTTTGGGAGAAGGTACGATGATGAAGGAACTGAAAGGAGTAGGTTCCAAGATCTTCTCAATGAGTGTGAGGCCATGCTGAGCATCTTCTTTATTTCGGATTATATTCCATTCTTGGGTTGGGTTGATAAACTCACGGGACTGCATGCACGTCTTGAAAAAAGTTTCAAGGAGTTGGATAAGTTTTCCCAAGAGGTCATTGAGGAACACATGGATCCCAATAGAAAGACTTCAGAGGAAGAGGACATAATTGATGTCTTACTTCAGCTAAAGAAGCAGCGTTCGTTTTCAATAGATCTCACTACTGATCACATCAAAGCGGTGTTCATGGACTTGCTTATAGCAGCAACGGATACCACTGCAGCAACAACAGTTTGGGCTATGACCGCACTAGTAAAACACCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGAAACCTGGGAGGTAAGAAAGATTTCCTAGATGAAGATGACATTCAGAAGTTTCCCTATTTCAAGGCTGTGATAAAAGAGACATTTCGATTACACCCACCAGTGCCACTCCTTTTGCCAAGAGAGACAAATAAAGCATGCATTATAGATGGCTATGAAATTGCGGCCAAGACATTGGTATATGTGAATGCTTGGGCTATTCATAGAGACCCTGACACTTGGAAAGACCCAGAAGAGTTTTTACCTGAGAGGTTCTTAGACAGCACTATAGATTTTCGCGGGCAAGATTTTgagttaatttcatttggtgCTGGTCGTAGAAGTTGCCCAGGTATTCTTATGGCAATCGCCTCATTGGATCTTATACTTGCtaatcttctttatttctttgattGGGAACTTCCAGCAGGGATGAAAAAGGAAGACATTGATACTGAAGGCTTGCCAGGACTCGTACAGTATAAAAAGAATCCGCTTTGTGTTTTGGCCAAATGTCACgcgtaa 1035 0.3961 MIKTISRHAASSKVTNSNEALLSLTCAIICRIAFGRRYDDEGTERSRFQDLLNECEAMLSIFFISDYIPFLGWVDKLTGLHARLEKSFKELDKFSQEVIEEHMDPNRKTSEEEDIIDVLLQLKKQRSFSIDLTTDHIKAVFMDLLIAATDTTAATTVWAMTALVKHPRVMKKVQEEIRNLGGKKDFLDEDDIQKFPYFKAVIKETFRLHPPVPLLLPRETNKACIIDGYEIAAKTLVYVNAWAIHRDPDTWKDPEEFLPERFLDSTIDFRGQDFELISFGAGRRSCPGILMAIASLDLILANLLYFFDWELPAGMKKEDIDTEGLPGLVQYKKNPLCVLAKCHA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2555 344 PRINTS E-class P450 group I signature 24 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 PRINTS E-class P450 group I signature 286 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 PRINTS E-class P450 group I signature 136 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 PRINTS E-class P450 group I signature 240 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 PRINTS E-class P450 group I signature 156 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 PRINTS E-class P450 group I signature 276 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 Pfam Cytochrome P450 1 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 279 288 IPR017972 GO:0005506|GO:0016705
Ssu4g2555 344 Coils Coil 170 190 - -
Ssu4g2555 344 PRINTS P450 superfamily signature 200 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 PRINTS P450 superfamily signature 147 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 PRINTS P450 superfamily signature 277 286 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 PANTHER CYTOCHROME P450 71B11-RELATED 1 342 - -
Ssu4g2555 344 SUPERFAMILY Cytochrome P450 3 340 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 Gene3D Cytochrome P450 1 336 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2555 344 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2555 Ssu-Chr4 64815468 64817622 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2555 1 343 Cytochrome P450 AT4G31500 48.555 1.17e-120 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2555 - - gmx:100805576 604.364