Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2551 ATGGTGTCACCACTTCTAATTCTATGCCTTACTCTTCCTGTGTTCCTATTATTCTGCTTCAAATACCACAGAACCTTCAAGAACCCACCCCTTCCACCTGGTCCTAGAGGCCTTCCCATAATAGGgaatcttcatcagatgaataATTCTGCTCTTAATGTGCAGCTATGGCAACTCTCAAAGAAATACGGGTCTCTATTTTCCCTTCAATTAGGTTTAAGGCCAGCCATTGTTGTTTCCTCCCCTAAATTGGCCAAAGAGGTAATGAAAGACCATGACCTTGAGTTTTGTGGACGACCTAAATTACTTGGCCAGCAGAAATTATCCTACAATGGGTTAGAGATGATATTTTCCCCATATAGTGTCTTTtggagagaaattaaaaaaatttgtgttgTCCATGTCCTTAGCTCCAGACGTGTCTCAAGATTTTCCTCAATAAGACAGTTTGAGGTCAAACAAATGATTAACAAAATATCTAGGCACGCCTCGTCTTCAAAGGTTACAAATTTGAATGAAGTGCTAATGTCTCTCACTAGCACTATTATATGTAGAATTGCCTTTGGGAAAAGGTATGAAGATGAAGGAACGGAGAGGAGTAGGTTTCATGGGTTGCTTAATGAGTGTCAGGCCATGATGGGcaccttttttttctctgaTTATATTCCTTTTTTGGGTTGGATTGATAAACTCACGGGACTGCATGCTCGTCTTGAACGAATTTTCAAGGAGTTGGATAAGTTTTACCAAGAAGTCATTGATGGACACATGGATCCCAATAGAAAGACCCCAGAGAATGAGGATATAATAGATGTCTTACTTCAACTGAAGAAGCAGCGTTCGTTTTCCGTAGATCTCACAAATGATCACATCAAAGCGGTGCTCATGGACATGCTTGTAGCAGCAACAGATACAACTGCAGCCACGTTAGTCTGGGCTATGACTGCACTACTAAAAACTCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGGACTTTGGgagATGGCTACGAAATTCCAGCCAAGACAATAGTGTATGTGAATGCTTGGGCTATCCATAGAGACCCTAAGGCTTGGAAAGACCCAGATGAGTTTTTACCCGAGAGGTTCTTAGATAGTACTATAGATTTTCGAGGGTTAGATTTTGAGTTAATTCCATTTGGTGCTGGTCGTAGAATTTGCCCTGGTATGCCTATGGCAATTGCTTCATTGGATCTTATTCTTGCTAATCTTCTTAATTCATTTGATTGGGAATTGCCAGCaggaatgaaaaaagaagacattGATACTGAAGTGTTGCCAGGACTTACGCAGCATAAGAAGAATCCTCTGTGTGTTTTGGCCAAGTACCCATTCTAA 1362 0.3847 MVSPLLILCLTLPVFLLFCFKYHRTFKNPPLPPGPRGLPIIGNLHQMNNSALNVQLWQLSKKYGSLFSLQLGLRPAIVVSSPKLAKEVMKDHDLEFCGRPKLLGQQKLSYNGLEMIFSPYSVFWREIKKICVVHVLSSRRVSRFSSIRQFEVKQMINKISRHASSSKVTNLNEVLMSLTSTIICRIAFGKRYEDEGTERSRFHGLLNECQAMMGTFFFSDYIPFLGWIDKLTGLHARLERIFKELDKFYQEVIDGHMDPNRKTPENEDIIDVLLQLKKQRSFSVDLTNDHIKAVLMDMLVAATDTTAATLVWAMTALLKTPRVMKKVQEEIRTLGDGYEIPAKTIVYVNAWAIHRDPKAWKDPDEFLPERFLDSTIDFRGLDFELIPFGAGRRICPGMPMAIASLDLILANLLNSFDWELPAGMKKEDIDTEVLPGLTQHKKNPLCVLAKYPF 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2551 453 Gene3D Cytochrome P450 25 334 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS E-class P450 group I signature 349 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 336 451 - -
Ssu4g2551 453 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 335 - -
Ssu4g2551 453 SUPERFAMILY Cytochrome P450 22 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 Gene3D Cytochrome P450 335 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Ssu4g2551 453 PANTHER CYTOCHROME P450 71B11-RELATED 336 451 - -
Ssu4g2551 453 PANTHER CYTOCHROME P450 71B11-RELATED 5 335 - -
Ssu4g2551 453 Pfam Cytochrome P450 32 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 Pfam Cytochrome P450 336 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2551 453 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2551 Ssu-Chr4 64658009 64660142 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2551 5 447 Cytochrome P450 AT4G31500 44.807 1.54e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2551 - - gmx:100801312 749.584