Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2550 ATGCTGTTACCACTTGTTCTATGTCTTACTCTCCCtgtgcttttctttttcctcatcCAAAACCTCAGAACCTTCAAGAAACCCCCCCTTCCTCCGGGTCCTAAAGGCCTTCCAATAATAGGAAATTTACATCAGTTGGATAACTCCATTCTTTGCCTGCAGCTATGGCAACTCTCAAAGAAATATGGGCctctattttctcttcaattagGTTTAAGGCCAGCGATTGTTATTTCCTCACCTAAAATTGCAGAAGAGGTCCTCAAAAACTATGACCTTGAGTTTAGTGGACAACCTAAACTACTTGGCCAGCAGAAACTGTCCTATAATGCGTCAGAGATTGCATTTTCCCCATACAATGAATACTGGAGAGAGATCAGAAAGATTTGTGTTGCCCATATCTTTAGCTCCAAGTGTGTCTCTAGCTTTACTCTATAA 438 0.379 MLLPLVLCLTLPVLFFFLIQNLRTFKKPPLPPGPKGLPIIGNLHQLDNSILCLQLWQLSKKYGPLFSLQLGLRPAIVISSPKIAEEVLKNYDLEFSGQPKLLGQQKLSYNASEIAFSPYNEYWREIRKICVAHIFSSKCVSSFTL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2550 145 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2550 145 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2550 145 PANTHER CYTOCHROME P450 71B11-RELATED 3 144 - -
Ssu4g2550 145 Gene3D Cytochrome P450 22 144 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2550 145 Pfam Cytochrome P450 31 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2550 145 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 3 144 - -
Ssu4g2550 145 SUPERFAMILY Cytochrome P450 31 142 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2550 Ssu-Chr4 64579098 64590344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2550 2 143 Cytochrome P450 AT4G31500 47.183 1.12e-35 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2550 - - gmx:100787727 225.328