Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2549 atgaacaaaaaaatatctgGGGATGCCTCTTCTTCGGGTGTTACAAACTTGAGTGAGTTACTAATTTCTCTCTCAAGCGCTGTAATATGCAGAATTGCTTTTGGGAGAAGGTATGAGGACGAAGGAAGTGAAAGGAGTAGGTTCCATGAGTTGCTCGATGAGCTTCAGGCCATGATGGGTACCTTCTTTATTTCAGATTATATTCCATTCACGGGTTGGATTGATAGACCTAGAGGATTTCACGCACGTCTTAAACGAAATTTCAAGGAGTTTGATAAGTTCTACCAAGAGGTAATTGATGAACACCTGGATCCGAATAGACAAGACACAGAGGAACAGGACATGGTTGATGTCCTGCTTCAATTGAAGAATGATCGTTCACTTTCAATTGATCTTAGTTATGATCACATCAAAAGGGTCCTCATGGTATGGCGTTTTAATTCCTATGTcctataa 456 0.3882 MNKKISGDASSSGVTNLSELLISLSSAVICRIAFGRRYEDEGSERSRFHELLDELQAMMGTFFISDYIPFTGWIDRPRGFHARLKRNFKEFDKFYQEVIDEHLDPNRQDTEEQDMVDVLLQLKNDRSLSIDLSYDHIKRVLMVWRFNSYVL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2549 151 Pfam Cytochrome P450 3 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2549 151 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 142 - -
Ssu4g2549 151 PANTHER CYTOCHROME P450 71B11-RELATED 1 142 - -
Ssu4g2549 151 SUPERFAMILY Cytochrome P450 10 143 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2549 151 Gene3D Cytochrome P450 1 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2549 Ssu-Chr4 64578622 64579077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2549 1 142 Cytochrome P450 AT4G31500 43.662 2.24e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2549 - - gsj:114405918 244.973