Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2503 ATGAGCTGCCATCTCATTGGTGTGCTGAAGTCCCTCCCTTTGGGTTTACTATATTCATATGATTTGAACCCTTTAGTGTTTCAAAGCTTATTGCAAAAACAATTCTATTCAACACCTGAATCTGTACACAAGATGGGGTGTTTTGCTGTCTTGAaacacaagaagaaaaagattgatCAAATCGTATACTCAAAATGTGTCAGCCGTGATGAACATGTACCTACAGTGCTTCCTGAACCTCAAGCCCATACTCATTCACTGCAGTCTGCACCTCCCAGTTTTAGGACTAGAGTGAAATCTGTTCACCCCATTCATAAAGTTACCAATAACAGAACACGGGCATTATCTGCTCCATCAGCTCTTGATGTAGCCAAACACGATGCTCTGACAACGGTTGAGTTTGAGGAACGAGAAGAATCAAGGTATCAAGTGGGGTTGATGAAGGAGCAACATTCATCTAGTCCACAACCTTTACCTCTTCCATCTTGTCAAGGTGGTGGTGCATTGAAGGCTACTGGCAGCTTTAAGTCAGGGACAGCTAGTGGTCCTCTATATGCTTCTCGACCGGCTCCTGATGCAGCAGAACAAGATGCTTTGGCCTCGGTTGAGTATGAGGAACAAGAAGTGTTAAAACACCGCGTTGGATTAATGAAGGAGCATCGTTCATCTAATCCACTACCTTTGCCTCTTCCATCTCATCAGAGTGGTGGTGCTGCATTGAAGGCTAACAGCAGCTTTAAGTCAGGGATGGCTAGTGGTCCTCTATATGCTTCTGGACCTTTGCCTCTTCCTCCTACTAGGTTGCTCAGAAACTTTCCATTTGAGGAAATTGCTGCTGCTTGCCACAACTTTTCTTCAGATCGATGCATGTCAGAATGTCTTTCTTCTACCATCTATAGCGCTTCGTTTGGTGATGATGCTTCAAGTGCAAAGAAGTTTGAAGCCACTGTCACCCGCCTTCATTCATCAACTCAGGGATTGAAGGAATTCATAAATGACGTTAATACCCTTGCATCTTTGCAACATCTGAACCTCTGTAAATTGCTAGGATTTCATGCACGCGATGGTTCTGAACCAAGGATGTTGGTTTATGAGAGGTTATGCCATGGTAGCTTGGGCCACCTGTTGTTTGGGAGATCAGACGGCCCTTCAATTGATTGGAACTCACGAATGAAAATTGCCATATGTGCTGCACAAGGTCTTGTTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAACAGCCAACATACAGATTGACAAAGATTTCGGTGCAAAGCTTTCTGGGTATGGTTGTGTTGGACGTATTCCTGAGGAAGAGATTTCAAGCAGTTCATGTGCTGTTGGAAACCTGTCAGTGGAGACGTTGGAAAGAGGAATTCTTACTCCAAAAAGCAATGTATGGAGTTTTGGAATTATTCTTTTGGAGCTACTTACTGGCAGAAAGAATCTTGATAGCCATCACCCCAAGGAAGAGAGGAACTTGGTCAAGTGGAGTCGGCCTTTCCTGGCCGATGATTTTCGACTGTCACTGATTATGGATCCTCAACTTAAGGGTCGCTTTCCTCCCAAAGCAGCAAGAACAGTGGCTGACATTGCACAAAGATGCCTCCAAAAGGAGCCATCAGAAAGACCCACCATGAGAACCATTGTTGAGCATCTCAAAACGGTACAAGATATGAAGTACTCTTGTTGGTTCCCACTGCAAGAGCCTGCAGCTATGCCTTCAAAACAAATGTCAAGATCACCAAGTCTTAATGGTATCATATGTCATGCACCTAGGTTGAATTTCTCTCCCTCAGCACCATCAGCCAGACCATCTGTTTCACCTCCAAGATGGTCTGGTGTGCCCACACTGCATCTTCCTCTTCGCGCTTGCTCCTCCACTTTCTCTATGGAGGAGATAGGTAGGCCGGAAAGCAGGAAGTCATCATCCTCAATGTGTAGGAGAGATAGTGTTGTAGGATATTGA 1986 0.4421 MSCHLIGVLKSLPLGLLYSYDLNPLVFQSLLQKQFYSTPESVHKMGCFAVLKHKKKKIDQIVYSKCVSRDEHVPTVLPEPQAHTHSLQSAPPSFRTRVKSVHPIHKVTNNRTRALSAPSALDVAKHDALTTVEFEEREESRYQVGLMKEQHSSSPQPLPLPSCQGGGALKATGSFKSGTASGPLYASRPAPDAAEQDALASVEYEEQEVLKHRVGLMKEHRSSNPLPLPLPSHQSGGAALKANSSFKSGMASGPLYASGPLPLPPTRLLRNFPFEEIAAACHNFSSDRCMSECLSSTIYSASFGDDASSAKKFEATVTRLHSSTQGLKEFINDVNTLASLQHLNLCKLLGFHARDGSEPRMLVYERLCHGSLGHLLFGRSDGPSIDWNSRMKIAICAAQGLVFLHEEGPFQAMYNEFSTANIQIDKDFGAKLSGYGCVGRIPEEEISSSSCAVGNLSVETLERGILTPKSNVWSFGIILLELLTGRKNLDSHHPKEERNLVKWSRPFLADDFRLSLIMDPQLKGRFPPKAARTVADIAQRCLQKEPSERPTMRTIVEHLKTVQDMKYSCWFPLQEPAAMPSKQMSRSPSLNGIICHAPRLNFSPSAPSARPSVSPPRWSGVPTLHLPLRACSSTFSMEEIGRPESRKSSSSMCRRDSVVGY 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2503 661 MobiDBLite consensus disorder prediction 638 661 - -
Ssu4g2503 661 MobiDBLite consensus disorder prediction 220 239 - -
Ssu4g2503 661 Gene3D Transferase(Phosphotransferase) domain 1 368 570 - -
Ssu4g2503 661 ProSiteProfiles Protein kinase domain profile. 284 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g2503 661 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 90 190 - -
Ssu4g2503 661 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 266 654 - -
Ssu4g2503 661 Pfam Protein tyrosine and serine/threonine kinase 307 559 IPR001245 GO:0004672|GO:0006468
Ssu4g2503 661 PANTHER OS01G0588500 PROTEIN-RELATED 90 190 - -
Ssu4g2503 661 PANTHER OS01G0588500 PROTEIN-RELATED 266 654 - -
Ssu4g2503 661 PANTHER OS01G0588500 PROTEIN-RELATED 197 261 - -
Ssu4g2503 661 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 197 261 - -
Ssu4g2503 661 Gene3D Phosphorylase Kinase; domain 1 265 365 - -
Ssu4g2503 661 SUPERFAMILY Protein kinase-like (PK-like) 263 572 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2503 Ssu-Chr4 63151620 63155444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2503 259 563 Receptor kinase-like Gene Family AT4G02010 36.656 1.73e-51 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Ssu4g2503 PK_Tyr_Ser-Thr 7.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2503 - - aprc:113849641 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2503 4 63151620 63155444 Ssu4g2503 4 63151620 63155444 ECH
Ssu3g0955 3 22544937 22547874 Ssu4g2503 4 63151620 63155444 PCT