Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2483 ATGGCATCGCGTGGGTATTTCTCTGTTCTTCTCGATGCCTTTGTGCTTGCAGCTCTTGCAACCTCAGCTTTCTCACAATTGTCACCTAGTTACTATGACTACTCGTGCCCTAATGCTTTGAGCACTATCAAAAGTGTCGTGGAGGCCGCGGTGCAGAAAGAGCGCCGTATGGGCGCATCCTTGCTACGCTTGCACTTCCATGATTGCTTTGTTAACGGTTGTGATGGTTCAATTCTTCTAGACTCCACATCCGCCATTGACAGCGAAAAGAATGCAAGACCAAATTTCCAATCTGCTCGAGGGTTTGAAGTGGTGGATGAGATCAAGCAGGCTGTGGACCAAGCATGTGGAAAACCAGTTGTTTCTTGCGCAGACATATTAGCTGTTGCCGCTCGTGACTCCGTGGTTGCGgaGGCCACCGTGTGTGGCGTCGTAGCAGGCGAATCCACCCTGGCCATCTTTGACGCCTCCGCCACTGTGTGTGGCATCGTAGCAGGCGAATCCATGCGCCGCATTGAGTGTTACCATTAG 531 0.5141 MASRGYFSVLLDAFVLAALATSAFSQLSPSYYDYSCPNALSTIKSVVEAAVQKERRMGASLLRLHFHDCFVNGCDGSILLDSTSAIDSEKNARPNFQSARGFEVVDEIKQAVDQACGKPVVSCADILAVAARDSVVAEATVCGVVAGESTLAIFDASATVCGIVAGESMRRIECYH 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2483 176 SUPERFAMILY Heme-dependent peroxidases 26 137 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu4g2483 176 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g2483 176 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g2483 176 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g2483 176 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g2483 176 Pfam Peroxidase 44 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g2483 176 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g2483 176 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g2483 176 PANTHER PEROXIDASE 72-RELATED 8 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g2483 176 PANTHER PEROXIDASE 70-LIKE 8 139 - -
Ssu4g2483 176 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Ssu4g2483 176 ProSiteProfiles Plant heme peroxidase family profile. 26 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g2483 176 Gene3D - 27 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2483 Ssu-Chr4 62457094 62462343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2483 26 137 Peroxidase AT5G05340 66.964 6.45e-48 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2483 K00430 - gmx:100814067 238.039