Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2400 ATGGACATGGACGTGGACGAAACTTCTGCACCCAAAGAGGGAAAGCCCGTTTTGGTGATCTTGGTGGGAGCACCGGGGAGCGGGAAGTCCACCTTTTGCGAAGAAGTTATGCGTTCCTCTACTCGCCCTTGGGTTCGCGTTTGCCAGGACACTATTGGAAATGGTAAAGCAGGAAATAAAGCTCAGTGCCTAAGCAGTGCAACGAGAGCATTGAAGGATGGGAAGAGTGTATTTATTGATAGGTGCAATCTTGACAGAGAACAGCGCTCAGAATTTATAAAGCTTGGTGGTGGACCCCAAATAGATGTTCATGCAGTTGTACTTGATCTTCCTGCTAAGCTTTGTATTTCTCGATCCGTCAAACGAACTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAAAATAAAGAGCTTCCCAAATTAAGTGAAGGCTTTAACCGAATAACATTTTGTCAGAGTGAGAGTGATGtcaaaaatgctattaatacATACAGCACAGTTGGTCCACTGGATATTCTTCCACATGGCTGCTTTGGCCAGAAGAATCCAGATTCCAAAATTCAAGTTGGTATAATGAAGTTCCTAAAAAAAGCAGAGGTTCCAAATGCTGCTGCATCTAGAGAAAGTGGCATTGGAGACCCTACTTCCCAGACTCCGTGCAAAGATAAGGAAATGCTTTCCTCAATTCCAGATAATGCCAACTTAGAGACAAAGGAAGTAGAAGGCCAACCAGTTGGCTCTGCTAGTTCCCATGCCAATCAAGTTTCTCTGGACGATATTCCCACTCTGGCATTTCCATCAATTTCAACATCTGATTTCCAATTCAACCATGAGAAGGCAGCTGATATTATTGTTGAGAAGGTTGTAGAGTTCTCAAATAAGTTTAGTAATGCCAGACTTGTTCTTGTTGACTTGTCTCATAAGTCAAAGATTCTGTCCTTAGTTAAAGGCCAAAAACATTGA 990 0.4242 MDMDVDETSAPKEGKPVLVILVGAPGSGKSTFCEEVMRSSTRPWVRVCQDTIGNGKAGNKAQCLSSATRALKDGKSVFIDRCNLDREQRSEFIKLGGGPQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQNKELPKLSEGFNRITFCQSESDVKNAINTYSTVGPLDILPHGCFGQKNPDSKIQVGIMKFLKKAEVPNAAASRESGIGDPTSQTPCKDKEMLSSIPDNANLETKEVEGQPVGSASSHANQVSLDDIPTLAFPSISTSDFQFNHEKAADIIVEKVVEFSNKFSNARLVLVDLSHKSKILSLVKGQKH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2400 329 MobiDBLite consensus disorder prediction 212 231 - -
Ssu4g2400 329 Gene3D Leucine Aminopeptidase, subunit E, domain 1 243 326 IPR043472 -
Ssu4g2400 329 SUPERFAMILY Macro domain-like 268 310 IPR043472 -
Ssu4g2400 329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 161 IPR027417 -
Ssu4g2400 329 Gene3D - 3 175 IPR027417 -
Ssu4g2400 329 PANTHER BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE 6 326 - -
Ssu4g2400 329 PANTHER POLYNUCLEOTIDE KINASE 3-PHOSPHATASE, EUKARYOTA 6 326 - -
Ssu4g2400 329 Pfam AAA domain 18 146 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2400 7 327 C2H2 Transcription Factor Family AT5G01310 60.748 1.64e-127 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2400 K10863 - gmx:100786762 583.563