Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2374 ATGGAAATGGCCTCCACTCCCCGTACCGTCGAAGAGATCTTCAAGGACTACAGCGCCCGCAGAACCGCCATCGTTCGCGCTCTCTCTCAAGATGTGGACGAATTCTATGGACTCTGCGATCCAGACGTTAAGATTGACTTGGATTGGGTTTGTTTTTCTGAGACACATTGggttttggattttgatttgGGCGTGAGGTTTGATAGACAGTTGACTGGTTGA 222 0.4595 MEMASTPRTVEEIFKDYSARRTAIVRALSQDVDEFYGLCDPDVKIDLDWVCFSETHWVLDFDLGVRFDRQLTG 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2374 73 PANTHER ZINC FINGER, FYVE/PHD-TYPE, ZINC FINGER, RING/FYVE/PHD-TYPE, ALFIN-RELATED 3 44 - -
Ssu4g2374 73 Pfam Alfin 9 60 IPR021998 GO:0006355|GO:0042393
Ssu4g2374 73 PANTHER CPG BINDING PROTEIN 3 44 IPR045104 GO:0006355|GO:0042393
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2374 4 44 Alfin-like Transcription Factor Family AT5G05610 65.854 2.54e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2374 - - gmx:100779170 86.6557