Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2371 atggCAACCCAATTGAACCATGTGTTCAGAATTTCAATTCTGAAGCACAAGACCCAATCAGAGACCCCTTTGACAACATCACAAAGAGCCCCAAGATTTCAAGTAATCAATGCAACATCTTCAACAGGCAGTGCAAGGCAGCTCATAGAGTCTGGCACAGTCAGGCCCATTTGGCCCAAAGATGCTTCCACAGCCATGAACTCAGAGGGCTTTATCCTCCTTGATGTTAGGCCAGCGTGGGAGAGAGAGAAGGCACGTGTGACGGGGTCTCTGCACGTGCCAATCTTTGTGGAAGACAAGGATAACAGTCCCATAACTCTGCTTAAGAAGTGGGTGCATTTTGGGTACATTGGCTTGTGGACTGGCCAGTACCTCACTACTGTGAACTCTGAGTTCCTTAGTCAAGTGGAAAATGCCATTCCTGGTAAGGACACCAAGCTTCTTGTGGCTTGTGGAGAAGGATTAAGGTCAATGACAGCAGCTTCAAAACTGTATAATGGAGGTTACAAAAATCTGGGATGGTTGGCTGGAGGCTTTAATCGTTCAAAGGACAATGACTTTCCAGCAGTAGAAGGAAAAGAGAAGCTGCAACATGCTACAGTTGGGGGAGTTTCTTACCTCTTCCTTCAGTTGCTCATATTTCTACAGGCTGTGGGTTAA 660 0.4621 MATQLNHVFRISILKHKTQSETPLTTSQRAPRFQVINATSSTGSARQLIESGTVRPIWPKDASTAMNSEGFILLDVRPAWEREKARVTGSLHVPIFVEDKDNSPITLLKKWVHFGYIGLWTGQYLTTVNSEFLSQVENAIPGKDTKLLVACGEGLRSMTAASKLYNGGYKNLGWLAGGFNRSKDNDFPAVEGKEKLQHATVGGVSYLFLQLLIFLQAVG 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2371 219 CDD RHOD 61 180 - -
Ssu4g2371 219 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 48 193 IPR036873 -
Ssu4g2371 219 ProSiteProfiles Rhodanese domain profile. 67 191 IPR001763 -
Ssu4g2371 219 Pfam Rhodanese-like domain 59 181 IPR001763 -
Ssu4g2371 219 Gene3D - 54 202 IPR036873 -
Ssu4g2371 219 SMART rhod_4 57 188 IPR001763 -
Ssu4g2371 219 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 219 IPR044614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2371 Ssu-Chr4 57995795 57997111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2371 1 206 Sulfurtransferasese or Rhodanese AT3G08920 56.796 6.43e-82 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2371 - - gmx:100795945 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2371 4 57995795 57997111 Ssu4g2371 4 57995795 57997111 ECH