Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2319 ATGCGCCGCATCGGCACGCATAACACGGTGGTGACGGCTAACCCTCGCAACGTGGAGCACATCCTGAAGACCAATTTCAACAACTTCCCCAAAGGGAAGCCCTTCACCGAAATCCTCGGCGACCTTCTCGGGTGCGGCATATTCAACGTGGACGGCGAGCTGTGGCACGCGCAACGCAAGCTAGCGAGCCATGAGTTCACCACGCGCTCCCTCAGGGACTTCGTCTTGAAGACGCTCCGAGAAAAGGTCCAACACAGGCTTCTCCCGCTATGTGATCGACCTGCGAGACGTGCTGCGGAGGCTCACCTTTGA 312 0.5865 MRRIGTHNTVVTANPRNVEHILKTNFNNFPKGKPFTEILGDLLGCGIFNVDGELWHAQRKLASHEFTTRSLRDFVLKTLREKVQHRLLPLCDRPARRAAEAHL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2319 103 PANTHER CYTOCHROME P450 2 93 - -
Ssu4g2319 103 Gene3D Cytochrome P450 2 100 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2319 103 SUPERFAMILY Cytochrome P450 3 87 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2319 103 Pfam Cytochrome P450 3 75 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2319 103 PANTHER CYTOCHROME P450 94B3 2 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2319 Ssu-Chr4 55540025 55540336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2319 1 95 Cytochrome P450 AT3G01900 62.105 7.33e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2319 K20665 - gmx:100797785 164.851