Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2318 ATGAAGAGGGCGTTCAACGTCGCCTTAGAGAAGGTGCTGAAAGAAGCGGTGAGGCTGGTGCACAAGTCGGTGGCGGAGATTATAAGAGCGAAGAAGAGAGAAGTCGAAAACGGCACCGAAAAAGGCGGGACCGACTTGTTGGTGTGGTTGTTGGAGGCTAGACATGAGGAGACGGTGGTGAGGGACATGGTTATAAGCATGATAATGGCGGGGAGGGACACGACTTCCGAGGCAATGACGTGGCTGTTTTGGCTATTGTCAAAGCATTGA 270 0.5222 MKRAFNVALEKVLKEAVRLVHKSVAEIIRAKKREVENGTEKGGTDLLVWLLEARHEETVVRDMVISMIMAGRDTTSEAMTWLFWLLSKH 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2318 89 Pfam Cytochrome P450 5 89 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2318 89 SUPERFAMILY Cytochrome P450 7 89 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2318 89 Gene3D Cytochrome P450 2 89 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2318 89 PANTHER CYTOCHROME P450 94B3 1 89 - -
Ssu4g2318 89 PANTHER CYTOCHROME P450 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2318 Ssu-Chr4 55539608 55539877 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2318 1 89 Cytochrome P450 AT5G63450 58.889 1.59e-26 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2318 K20665 - gmx:100810294 119.783