Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2317 ATGAGGCTGTACCCGCCCGTGGCTTGGGACTCAAAGCACACGGGCGATGCTGACGTGTTACCTAATGGGACCTGCGTGGGGAAAGGGGACAGGGTCACTTATTTCTCATATGGTATGGGAAGAATGGAGGCTTTGTGGGGGAAGGATTGTTGTGAGTTTAAACCCCAGTGTTGGTTCCATGAGGACGATATTAATAATGGGGTTCTTAAGTGTGTGAATCCTTATAAGTTTTCGGTGTTTCTGGCGGGTCCTAGAGTGTGTCTTGGGAAGGAAATGGCTTTTATTCAGATGGAGTATGTGGTGGCTTCTATTCTTAACCGCTTTGTAATTTCGCCGGTCTTAGACCACCACCCACGTTTTGTTCCTCTTGTAACGGCACATATGGTTGGGGGATTCAAAGTGAGGGTCCACAACAGAACAACTGGAACTGAGACTGAGAAGTGA 444 0.4797 MRLYPPVAWDSKHTGDADVLPNGTCVGKGDRVTYFSYGMGRMEALWGKDCCEFKPQCWFHEDDINNGVLKCVNPYKFSVFLAGPRVCLGKEMAFIQMEYVVASILNRFVISPVLDHHPRFVPLVTAHMVGGFKVRVHNRTTGTETEK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2317 147 PANTHER CYTOCHROME P450 94B3 1 137 - -
Ssu4g2317 147 PANTHER CYTOCHROME P450 1 137 - -
Ssu4g2317 147 Pfam Cytochrome P450 1 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2317 147 Gene3D Cytochrome P450 1 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2317 147 SUPERFAMILY Cytochrome P450 1 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2317 Ssu-Chr4 55539044 55539487 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2317 1 140 Cytochrome P450 AT3G48520 63.121 1.11e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2317 K20665 - gmx:100800427 253.062