Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2316 ATGATCGACCTGCAAGACATGTTCGAAGACTCACCTTCGACACGGTGTTCAAGTGTGGAAGATAAAAAGGATGTTCAACATCAGCTCGGAGAAGGCGTTGAAGGAAGCGATGAAGTTGGTGCACGATTCAATGGAGATTATaacaatgaagaaaagagaaatgacGTCGAAAAAGGCGAGACTGATTTGCTGATGCAGTTATTGGAGGTGGGACATGAGGAAATGGTGGTGAAGGATATGGTTATAAGCATGATAATGGTGGGGAGGGACACAACTTCCGTAGCGATGATGTGGCTATTTTGGTTGTTGTCGAAGCATCGAGAGGAAGAGGCATTGATAGTGAGGGAGGTTTGCGGTTGTGGAGACCAAAGCCAAAGTGAGGGTTTGGATTATGAGTGTTTGAAagaaatgaaactattgaaggCTTGTTTATGTGAGTCGATGAGGCTGTACCCTGCCAGTGGCATAGGACTCGAAGCACACTTGTGGTGCTGA 495 0.4283 MIDLQDMFEDSPSTRCSSVEDKKDVQHQLGEGVEGSDEVGARFNGDYNNEEKRNDVEKGETDLLMQLLEVGHEEMVVKDMVISMIMVGRDTTSVAMMWLFWLLSKHREEEALIVREVCGCGDQSQSEGLDYECLKEMKLLKACLCESMRLYPASGIGLEAHLWC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2316 164 SUPERFAMILY Cytochrome P450 52 156 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2316 164 PANTHER CYTOCHROME P450 94B3 56 153 - -
Ssu4g2316 164 Gene3D Cytochrome P450 36 160 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2316 164 MobiDBLite consensus disorder prediction 15 31 - -
Ssu4g2316 164 PANTHER CYTOCHROME P450 56 153 - -
Ssu4g2316 164 MobiDBLite consensus disorder prediction 1 55 - -
Ssu4g2316 164 Pfam Cytochrome P450 58 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2316 Ssu-Chr4 55529325 55529928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2316 58 152 Cytochrome P450 AT3G48520 54.737 9.15e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2316 K20665 - gmx:100810294 144.821