Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2303 atggagtggaagagtgtATTGAAGGAACTCAAGAAAATTCCTAATGATAAAGTACAAGcgaagttaaaaataagctatGATGGTTTAAGTGatgaaacaaagaaagaaatattcctTGATATAGCTTGTTTCTTTATTGGAATGGACCGAAATGatgttatacatatattaaatggTTGTGAACTTTCTGCCGAAAATGGAATACGTGTCCTTGTAGAGCAAAGTCTTGTAACTATAGATGATAAGAACAAGCTTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATCATTCATGCAGAATCACTAAAGTATCCTGGGGAGCGTAGCAGATTATGGATTCATGAGGACGTGCTTGATGTATTATCAAAAGAAACTGTAAGAActtcatttattgtttttggatttaaaatatctaaagcCAATTGA 432 0.2639 MEWKSVLKELKKIPNDKVQAKLKISYDGLSDETKKEIFLDIACFFIGMDRNDVIHILNGCELSAENGIRVLVEQSLVTIDDKNKLGMHDLLRDMGREIIHAESLKYPGERSRLWIHEDVLDVLSKETVRTSFIVFGFKISKAN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2303 143 SUPERFAMILY "Winged helix" DNA-binding domain 16 123 IPR036390 -
Ssu4g2303 143 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 133 IPR044974 GO:0006952
Ssu4g2303 143 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2303 Ssu-Chr4 54614044 54614475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2303 2 127 WRKY Transcription Factor Family AT4G12020 38.889 2.99e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2303 - - gmx:100800964 209.92