Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2298 ATGGACTTGAATGCCTCACCGGTTCCGGAGGAAGATGACGATAGTTTTGAGGAGAATATACATGTTGAAGAGTTTCATGCACCTGAAGAACGCATAGAAAGTGGAGCTGATATAGCTCGCCGGAACAGAGGAATAGAGGAATTAACTGTCAACGGTGGCGGGCTTGGCGGCGCAAATCAAGGAATGATGGCGGCGGCGAAGACCGAAGaaaccgGATTAGGTGAATCAACCCAGATTTTTTTTGCCCAAAGTGAGGCGCGTTCAAGATCGTCGATCACACGTTTTTACGTGTATGATCGCGATTTCACTACGATCCCACTTGAGTGCGATCTTACCGTTGAGTCAGCACGGAGGCATGCTGTGATGCCATCGATGTGTAGGATTGTGCAATTCCACGAGGAAGATTGCGATCCTAACAACCATGCAAAGAACACATTACCCAAggaattttaa 453 0.4636 MDLNASPVPEEDDDSFEENIHVEEFHAPEERIESGADIARRNRGIEELTVNGGGLGGANQGMMAAAKTEETGLGESTQIFFAQSEARSRSSITRFYVYDRDFTTIPLECDLTVESARRHAVMPSMCRIVQFHEEDCDPNNHAKNTLPKEF 150
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2298 Ssu-Chr4 54503797 54506344 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2298 1 39 Protein tyrosine phosphatase (PTP) family AT3G09100 53.846 1.33e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2298 K13917 - lja:Lj3g3v1603870.1 80.1073