Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2232 ATGGCTGAAAATCACGAAGGGGAAGTGAAGCTTTTGGGATTTGTTGGAAGCCCATTTACTTACAGGGTGCAGCTTGCTCTGAAACTGAAGGGAGCCCAATACGAATTCCTGGAAGACAATTTGGAACACCAGAGCCAACTCCTTCTCAAATACAACCCTATTCATAAGAAGGTTCCTGTGCTCGTTCACAACGAGAAGCCCATAATAGAGTCCCTTGTGATTCTTGAATATGTAGATGAGACCTGGAATGGGAACCCCATCTTGCCTGAAGAACCTTATCCAAGAGCCTTAGCTCGTTTCTGGGCCAAGTTCATCGATGAGAAGTGCTTGTCTGCTGTATGGAAAGCTGCATCGACCTTTGACGAGAAAGAGCGGGAGAAGGCTGTTGAGGAATCACAAGAGGTTCTGCAGATTCTCGAGAATGAGCTTAAGGACAAGTTCTTTGGTGGAGAAGCACTTGGGTTGGTGGACATTGTTGGTACCTTCGTAGCATTTTGGCTCCCAGCTATTGAACAACTTGTGGGGCTGGAGTTGCTGACCAGTGAGAAATTCCCAAAGCTCTACAATTGGAGCCACGAAGTGCTCAACCTTCCCGTGGTTAAAGAAACTCTGCCACCTAGAGAACCATTTTTTGCTGCCTTCAAAGCTCGCCTTGAAAGCCTTACTCCTTCAAAATAG 678 0.4661 MAENHEGEVKLLGFVGSPFTYRVQLALKLKGAQYEFLEDNLEHQSQLLLKYNPIHKKVPVLVHNEKPIIESLVILEYVDETWNGNPILPEEPYPRALARFWAKFIDEKCLSAVWKAASTFDEKEREKAVEESQEVLQILENELKDKFFGGEALGLVDIVGTFVAFWLPAIEQLVGLELLTSEKFPKLYNWSHEVLNLPVVKETLPPREPFFAAFKARLESLTPSK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2232 225 SUPERFAMILY GST C-terminal domain-like 80 219 IPR036282 -
Ssu4g2232 225 Coils Coil 122 142 - -
Ssu4g2232 225 CDD GST_N_Tau 9 82 - -
Ssu4g2232 225 SFLD Main (cytGST) 6 221 - -
Ssu4g2232 225 Gene3D Glutaredoxin 1 90 - -
Ssu4g2232 225 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 5 219 - -
Ssu4g2232 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 224 IPR010987 -
Ssu4g2232 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 219 IPR045073 -
Ssu4g2232 225 Pfam Glutathione S-transferase, C-terminal domain 101 198 IPR004046 -
Ssu4g2232 225 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Ssu4g2232 225 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Ssu4g2232 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Ssu4g2232 225 CDD GST_C_Tau 92 217 IPR045074 GO:0004364|GO:0006749
Ssu4g2232 225 Gene3D - 91 225 - -
Ssu4g2232 225 SFLD Main.3: Omega- and Tau-like 6 221 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2232 Ssu-Chr4 52828029 52831689 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2232 1 222 Glutathione S-transferase Gene Family AT2G29420 50.000 6.23e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2232 K00799 - gmx:100806714 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2232 4 52828029 52831689 Ssu4g2232 4 52828029 52831689 ECH