Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2230 ATGGCCAAAGAGTATGGAGAAGTTCAGTTGTTTGGTGTGGGGGGAAGCCCCTATGCTAGAAGGGTGAGGATTGCCCTGGAAATGAAGGGAGTGCAATACACTTACTTTGAAGAAGATCTTAGGAATAAAAGTGATCTTCTTCTCAAATACAACCCTGTTCACAAGAAGGTGCCTGTGCTTGTCCACAATGGAAAACCCTTGGCTGAGTCCCTTGTGATCCTTGAATACATTGATGACACCTGGGGGAACCACCCCATCTTGCCTCAACAACCCTATGATAGAGCCTTGGCTCAATTTTGGTCAAGGTTCATTGATGACAAATGCCTGCCTGCAATAACAAAGGCCGCATTTACTGCGAACAAGGAGGAACGCGACAATAGCGCTGAGGAATCACTTGAGGCTCTTCAATTTCTTGAGAATGAACTCAAACACAAGTTCTTTGGAGGAGAGACTATTGGCCTAGTGGACATAGCCGCTGGCTTCATAGCTTTCTGGCTCCCTGCGATTGAAGAGGCTGTGGGGTTGAAGTTGCTGAGCTGTGAGAAGTTTCCAAAGCTTCATAAATGGGGTCAAGAATTCACCAACCATCCTGTTGTGAAAGAGAACCTGCCCCCAAGAGATAAACTTGTGGGCTTTTTCAAAGCTCGATATGCATCCATCACTGCTTCGAAGTAG 675 0.4637 MAKEYGEVQLFGVGGSPYARRVRIALEMKGVQYTYFEEDLRNKSDLLLKYNPVHKKVPVLVHNGKPLAESLVILEYIDDTWGNHPILPQQPYDRALAQFWSRFIDDKCLPAITKAAFTANKEERDNSAEESLEALQFLENELKHKFFGGETIGLVDIAAGFIAFWLPAIEEAVGLKLLSCEKFPKLHKWGQEFTNHPVVKENLPPRDKLVGFFKARYASITASK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2230 224 CDD GST_N_Tau 8 81 - -
Ssu4g2230 224 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 220 - -
Ssu4g2230 224 Gene3D Glutaredoxin 1 89 - -
Ssu4g2230 224 SFLD Main.3: Omega- and Tau-like 6 222 IPR045073 -
Ssu4g2230 224 Gene3D - 90 224 - -
Ssu4g2230 224 Pfam Glutathione S-transferase, N-terminal domain 8 78 IPR004045 -
Ssu4g2230 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Ssu4g2230 224 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Ssu4g2230 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Ssu4g2230 224 SFLD Glutathione Transferase (cytosolic) 6 222 IPR040079 -
Ssu4g2230 224 Pfam Glutathione S-transferase, C-terminal domain 107 197 IPR004046 -
Ssu4g2230 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Ssu4g2230 224 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Ssu4g2230 224 Coils Coil 121 141 - -
Ssu4g2230 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2230 Ssu-Chr4 52720016 52721643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2230 8 223 Glutathione S-transferase Gene Family AT3G09270 51.142 4.41e-81 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2230 K00799 - gmx:100306119 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2230 4 52720016 52721643 Ssu4g2230 4 52720016 52721643 ECH