Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2229 ATGGCTTCAGAGCGCGAAGAAGTGAGGCTGTTGGGCAAGTGGGCCAGCCCATTTAGCAACAGAGTAGAACTGGCTCTCAAACTCAAAGGAGTTCCGTACAAATACTCCGAGGAAGATCTGGCCAACAAGAGTGCTGACCTTCTCAAGTACAACCCCGTTCACAAGAAGGTCCCAGTTCTGGTCCATGATGGGAACCCTTTACCCGAGTCACTTATCATTGTTGAGTACATAGACGAGACATGGAAAAACAACCCCCTCTTGCCTCAAGACCCTTATGAGAGAGCCTTGGCTCATTTCTGGGCTAAGACCTTGGATGACAAGATCTTGCCTGCTATATGGAATGCTTGCTGGAGTGATGAGAAGGGGCGTGAGAAAGCTGTGGAGGAAGCCTTGGAGGCTTTGAAGATCCTGCAGGAAGCACTGAAGGACAAGAGGTTCTTTGGAGGAGAGAGCATAGGCTTGGTAGATATTGCTGCCAATTTCATTGGGTATTGGGTTGCTATATTGCAAGAAATTGCAGGGTTAGAGTTGCTTACCATTGAGAAATTTCCCAAGTTATATAAATGGAGTCAGGAGTTTGTCAATCACCCCGTGATCAAGGAGGGCCTGCCTCCTAGAGATGAATTGTTTGCTTTCTTCAAAGCTTCTGCTTCAAAGTAG 660 0.4727 MASEREEVRLLGKWASPFSNRVELALKLKGVPYKYSEEDLANKSADLLKYNPVHKKVPVLVHDGNPLPESLIIVEYIDETWKNNPLLPQDPYERALAHFWAKTLDDKILPAIWNACWSDEKGREKAVEEALEALKILQEALKDKRFFGGESIGLVDIAANFIGYWVAILQEIAGLELLTIEKFPKLYKWSQEFVNHPVIKEGLPPRDELFAFFKASASK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2229 219 CDD GST_N_Tau 8 81 - -
Ssu4g2229 219 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Ssu4g2229 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Ssu4g2229 219 SUPERFAMILY GST C-terminal domain-like 79 216 IPR036282 -
Ssu4g2229 219 Pfam Glutathione S-transferase, C-terminal domain 100 197 IPR004046 -
Ssu4g2229 219 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Ssu4g2229 219 Gene3D Glutaredoxin 1 86 - -
Ssu4g2229 219 Gene3D - 87 219 - -
Ssu4g2229 219 SFLD Main.3: Omega- and Tau-like 4 217 IPR045073 -
Ssu4g2229 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 216 IPR045073 -
Ssu4g2229 219 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Ssu4g2229 219 Coils Coil 124 144 - -
Ssu4g2229 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 216 - -
Ssu4g2229 219 SFLD Glutathione Transferase (cytosolic) 4 217 IPR040079 -
Ssu4g2229 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2229 Ssu-Chr4 52712925 52713840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2229 3 215 Glutathione S-transferase Gene Family AT3G09270 59.070 2.62e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2229 K00799 - gmx:100527381 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2229 4 52712925 52713840 Ssu4g2229 4 52712925 52713840 ECH