Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2163 atgCACGCCTCATCTTCAAAGGTTACAAATTTGAGTGAAGCACTCATGTCCCTTACGAGCACTATTATTTGTAGGATTGCCTTTGGAAGGAgGTATGAAGATGAAGGAGGGGAAAGGAGTAGGTTCCATGGGCTGCTCAATGAGTGTCAGGCCATGATGGGTACCTTCTTTTTTGCAGATTATATTCCTTTCGTAGGTTGGATTGATAGACTCACTGGACTGCGCGCTCGCCTTGAACGGAATTTCAAGGAGTTGGATGAGTTCTACCAAGAAGTCATTGATGAACACATGGATCCCAATAGAAAGACCCCTGAGAAAGACGATCTAATAGATGTCTTACTTCAACTGAAGAAGCAGCGTTCGTTTTCCGTTGATCTTACAAATGATCACATCAAAGCGGTGTTCATGAACATGCTTATAGGAGCAACGGATACAACTGCTGCCACGACAGTCTGGGCTATGACTGCACTACTAAAAAATCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGGAATTTGGGAGGTAGAAAAGATTTTCTAGATGAAGATGATATTCAAAAGCTCCCTTATTTCAAGGCTGTGATAAAAGAGACACTTAGACTGCATCTACCAGCACCGCTACTAGTGCAAAGAGAAACAAATGAACCATGTATTATAGATGGCTATGAAATTCCAGCCAAGACAATAGTATATGTGAATGCTTGGGCTATCCATAGAGACCCTAAGGCTTGGAAAGACCCAGAAGAGTTTTTACCCGAGAGGTTCTTAGATAGTACTATAGATTTTCGAGGGCAAGATTTTGAGTTGATTCCATTTGGTGCTGGTCGTAGAATTTGCCCTGGTATGCCTATGGCAATTGCCTCATTGGATCTTATTCTTGCTAATCTTCTTAGTTCATTTGATTGGGAATTGCCAGCaggaatgaaaaaagaagacgTTGATACTGAACTATTGCCAGGACTTACTCAGCATAAGAAGAATCCTCTCTGTGTTTTGGCCAAGTGTCGAATCTAA 1017 0.4041 MHASSSKVTNLSEALMSLTSTIICRIAFGRRYEDEGGERSRFHGLLNECQAMMGTFFFADYIPFVGWIDRLTGLRARLERNFKELDEFYQEVIDEHMDPNRKTPEKDDLIDVLLQLKKQRSFSVDLTNDHIKAVFMNMLIGATDTTAATTVWAMTALLKNPRVMKKVQEEIRNLGGRKDFLDEDDIQKLPYFKAVIKETLRLHLPAPLLVQRETNEPCIIDGYEIPAKTIVYVNAWAIHRDPKAWKDPEEFLPERFLDSTIDFRGQDFELIPFGAGRRICPGMPMAIASLDLILANLLSSFDWELPAGMKKEDVDTELLPGLTQHKKNPLCVLAKCRI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2163 338 PANTHER CYTOCHROME P450 71B11-RELATED 2 337 - -
Ssu4g2163 338 Coils Coil 75 95 - -
Ssu4g2163 338 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 337 - -
Ssu4g2163 338 SUPERFAMILY Cytochrome P450 5 337 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 273 282 IPR017972 GO:0005506|GO:0016705
Ssu4g2163 338 Coils Coil 164 184 - -
Ssu4g2163 338 Gene3D Cytochrome P450 1 337 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS E-class P450 group I signature 270 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS E-class P450 group I signature 18 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS E-class P450 group I signature 280 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS E-class P450 group I signature 150 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS E-class P450 group I signature 234 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS E-class P450 group I signature 130 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS P450 superfamily signature 280 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS P450 superfamily signature 141 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS P450 superfamily signature 271 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 PRINTS P450 superfamily signature 194 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2163 338 Pfam Cytochrome P450 4 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2163 Ssu-Chr4 49530059 49531697 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2163 3 337 Cytochrome P450 AT4G31500 50.296 2.01e-122 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2163 - - gmx:100801312 596.275