Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2162 ATGATGTCACCACTTCTAATTCTATGCCTTAATCTTCCTGTGTTTCTGTTATTCTTCTTGCGATACCGCAGAACCTCCAAGAACCTACCCCGTCCACCCGGTCCTAGAGGCCTTCCCATAATAGGGAATCTTCATCAGCTGAATAACTCTTCTCTTTATCTCCAGCTATGGCAACTCTCAAAGAAATACGGGCCCCTATTTTCCCTTCAATTAGGTTTAAGGCCAGCCATTGTTGTTTCCTCCCCTGAACTGGCCAAAGAGGTAATGAAAGACCATGACCTCGAGTTTAGCGGGCGACCTAAATTACTTGGCCAACAGAAATTGTCCTATAATGGGATTGACATTGCATTTTCCCATACAATAGTCATTGGAGAGAAATCAGAAAAATTTCTGTTGTCCATATCCTTAGCTCAAGGCGTGTCTCTAGCTTTTCCTCAATAA 441 0.4308 MMSPLLILCLNLPVFLLFFLRYRRTSKNLPRPPGPRGLPIIGNLHQLNNSSLYLQLWQLSKKYGPLFSLQLGLRPAIVVSSPELAKEVMKDHDLEFSGRPKLLGQQKLSYNGIDIAFSHTIVIGEKSEKFLLSISLAQGVSLAFPQ 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2162 146 Pfam Cytochrome P450 32 118 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2162 146 PANTHER CYTOCHROME P450 71B11-RELATED 5 119 - -
Ssu4g2162 146 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 119 - -
Ssu4g2162 146 SUPERFAMILY Cytochrome P450 22 113 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2162 146 Gene3D Cytochrome P450 19 129 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2162 146 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2162 146 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2162 Ssu-Chr4 49444641 49445081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2162 2 119 Cytochrome P450 AT4G31500 48.305 6.92e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2162 - - gmx:100801312 186.422