Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2127 ATGGCACGGCCGTGGAAGAATTGCTGCAGGGAAGTAGCTCCATTTTGTGCATTGGTTACAGTGCAGTTTACTGAGGTTGGCGTCAACATTCTATTCAAGGAAGCCACAATGAAAGGATTGAGCTACTATGTCTTCATCCTCTATTCATTTGCTCTCTCCACTCTTATTCTACTTCTCCCTTTGCCCTTCATCTTCCGCAgGTCAACAGGACTTCCATCGTTGAATTTGTGTATTCTTTGCAAAATTTCCTCCCTGGGATTGCTTGGATTTTTAGCTCAGCTTTGTGGGTATAAAGGCATTGACTTCAGCTCACCAACTCTTGCTTCTGCAATGGCCAACCTGCTTCCAGCTTTTACCTTCGTACTTGCGGTCTTTTTCAGGATGGAAAAGGCAGATTTAAGAAGTTCAAGCACTCAAGCCAAAATCATGGGTTCAATAGCATCCATAGCAGGTGCACTCATAGTTGTGCTCTATAAAGGACCTACAATCTTAAATGCTTCATCTCCATCACAAGCTCCTCCACTTAATTCTGCACTTGCATCTTCACAAAGGAATTGGGTTCTAGGCGGTTTTCTACTTGCCGTTGCATATATTCTAATGTCAATATGGTATATTGTGCTGACCCATATTATCAAATTGTATCCAGCAGAGCTGATTGTGACCTTCTTATGTAACTTGTGCGGGACTATCATAGCTGTCCCTGTATGCTTTTTAGCAGAAGAAAACTTGAGAAATTGGAAACTGAAACCTGATATAACAGTGGCGGCTATTTTATACTCAGCATTCTTTAGCATATTCTTCAGCACTATTGTTCACACATGGGGCCTCCATCTGAAAGGTCCTGTATATGTATCAATGTTTAAGCCTCTGTCGATTGCCATAGCTGCTGCTATGAGTGTTATATTCCTTGGTGAAGCTTTGTATCTAGGAAGTGTAGTTGGATCAGTAATACTGTGTATTGGGTTTTATGCTGTTATATGGGGGAAAGCAAAAGAAGAGGAATTGCATGAGGATGAGAACTACTGCTTTAGTAACTCTGGATCCCAATTAAACAGTAAGGTTCCTTTGTTGCACAGCTGA 1080 0.4148 MARPWKNCCREVAPFCALVTVQFTEVGVNILFKEATMKGLSYYVFILYSFALSTLILLLPLPFIFRRSTGLPSLNLCILCKISSLGLLGFLAQLCGYKGIDFSSPTLASAMANLLPAFTFVLAVFFRMEKADLRSSSTQAKIMGSIASIAGALIVVLYKGPTILNASSPSQAPPLNSALASSQRNWVLGGFLLAVAYILMSIWYIVLTHIIKLYPAELIVTFLCNLCGTIIAVPVCFLAEENLRNWKLKPDITVAAILYSAFFSIFFSTIVHTWGLHLKGPVYVSMFKPLSIAIAAAMSVIFLGEALYLGSVVGSVILCIGFYAVIWGKAKEEELHEDENYCFSNSGSQLNSKVPLLHS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2127 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 331 - -
Ssu4g2127 359 Pfam EamA-like transporter family 189 326 IPR000620 GO:0016020|GO:0016021
Ssu4g2127 359 PANTHER WAT1-RELATED PROTEIN 9 333 - -
Ssu4g2127 359 PANTHER WAT1-RELATED PROTEIN 9 333 IPR030184 GO:0016021|GO:0022857
Ssu4g2127 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2127 Ssu-Chr4 45469355 45472001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2127 5 336 Nodulin-like Gene Family AT5G40240 57.910 6.77e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2127 - - lang:109359378 431.409