Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2126 ATGGCAAAAAGGGTCTGCCACAAGGATTTGCTTCCTTTTGGGGCCATGGTGACCATGGAGTGCCTCAACGTTGCCTTGAATACTCTGTTCAAAGCAGCTACCTTGAGAGGGATGAGTTACCATGTCTTTGTTGTTTATGCTTATGCTGTTGCTGCTATTGTTCTCCTTCCAGCACCCTTTATCTCCAAAAGATCAAGAGTGCTTCCTCCACTCAGTTTCCCCGTACTACGCAAAATTGGTCTTCTTGGGCTAATAGGGTGTGCATCTCAGATCATGGGATATACAGGCATCAGTTTCGGTTCCCCCACTCTCTCTTCCGCGATAAGCAACTTGGTGCCTGCTTTTACGTTTTTGCTTGCCATCATTTTCAGGATGGAAAAGGTGGTTGTAAGAAACGCAAGTAGTCAAGCCAAGATGTTGGGTACCATAGTATCAATAACAGGAGCATTTGTAGTGACTCTGTACAAAGGACCGCCAATCATCATTGTTCATACACCTTCATTATCACTTCATCAACCAATTAACACTCTTAAATCGGTAGATCGAAGTTGGGCCATTGGTGGTCTTCTACTGACAGCAGAGTATATACTGGTTCCATTATGGTATATTATACAgGTGCAAATCATGAAGGTCTACCCCGATGAACTAACTGTGATcttcttttacaatttatgtGTAAGCATCATGGCTGCAATTGTCGGTATATTTACCGAGACAAATGCAAGCGCTTGGAAAATAGGACTAGATACATCATTGGCTTCCATAGTTTGCTCTgGAATTTTTGGTTCATTCGTGAACAATGCAGTTCACACGTGGGTACTACGTATAAAGGGGCCTGTCTATGTAGCAATGTTCAAGCCACTCTCAATTGCCATAGCTGTTGCCTTGGGAGTCATGTTCCTGGGTGATACTCTCCACCTCGGAAGTCTAGTTGGAGCCACAATAATATCGATTGGATTTTATACTGTAATGTGGGGTAAAGCAACCGAAGAGGCGGACGAAGATGTCCATGGTCAGCAATCACCAACCACAGAGAATGTTCCTCTCCTGCAAAGCTATAAAACTGATACAGCTGAAAAGAAAATGCATGGAAGTGTATAA 1101 0.4278 MAKRVCHKDLLPFGAMVTMECLNVALNTLFKAATLRGMSYHVFVVYAYAVAAIVLLPAPFISKRSRVLPPLSFPVLRKIGLLGLIGCASQIMGYTGISFGSPTLSSAISNLVPAFTFLLAIIFRMEKVVVRNASSQAKMLGTIVSITGAFVVTLYKGPPIIIVHTPSLSLHQPINTLKSVDRSWAIGGLLLTAEYILVPLWYIIQVQIMKVYPDELTVIFFYNLCVSIMAAIVGIFTETNASAWKIGLDTSLASIVCSGIFGSFVNNAVHTWVLRIKGPVYVAMFKPLSIAIAVALGVMFLGDTLHLGSLVGATIISIGFYTVMWGKATEEADEDVHGQQSPTTENVPLLQSYKTDTAEKKMHGSV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2126 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 327 - -
Ssu4g2126 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Ssu4g2126 366 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020|GO:0016021
Ssu4g2126 366 PANTHER WAT1-RELATED PROTEIN 9 347 - -
Ssu4g2126 366 PANTHER WAT1-RELATED PROTEIN 9 347 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2126 Ssu-Chr4 45397794 45401131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2126 1 356 Nodulin-like Gene Family AT3G28050 58.266 8.30e-148 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2126 - - gmx:100814137 646.736