Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2121 ATGGATCTGGAGTCTGTGATCtacaaaaactcaattaagGATGAATCATGGAAGACAGTGTTAACATTGGCTTATCAGAGTTTGGGAGTTGTGTATGGGGATTTAAGCACATCCCCACTTTATGTTTACAAAAGCACTTTTGCTGAGGACATTCAGCACTCAGAGACCAATGAAGAGATATATGGGGTGTTGTCTTTTGTGTTCTGGACTCTCACACTGATTCCACTCCTCAAGTATGTGTTCATTGTGCTTAGAGCAGATGACAATGGAGAGGGAGGGACTTTTGCTTTGTACTCTCTGCTATGCAGGCATGCCCAGGTGGGGTTGTTGCCTAATGTTCAGCTTGCAGATGAGGAACTAACGGAGTACACCAAGGATGGAACAGTGCCAATTGATAAGATGAATGTTGGGTTGGGGTTGAAATCTGTGTTGGAGAAACACAAGGTGCTGCAGAGGGTGCTGCTTGTTCTGGCTTTGATAGGGACCTGCATGGTTATTGGGGATGGTGTGCTTACGCCTGCTATTTCTGTTTTCTCTGCTGTGTCAGGCTTGGAGCTTTCCATGTCTAAAGAGCAGCATAGATATGTTGAAGTCCCAGTTGCTTGTGTAATACTGGTATTTTTGTTTGCACTTCAACATTATGGGACCCATCGTGTTGGGTTTTTATTTGCTCCGGTTGTGATGACCTGGCTGCTATGCATCAGTTGTATCGGTGTGTATAATATCTTACATTGGAATCCGCATGTTTACGAAGCTCTCTCTCCATTCTACATGTTCAAATTTCTGAAGAAGACTCAAAGGGGAGGTTGGATGTCCTTAGGGGGCATTCTACTGTGTATAACAGGTTCTGAAGCTATGTTTGCTGATCTAGGACATTTTTCACAGTTGTCAATTAAGATTGCTTTTACCTGTTTGGTATACCCTTCTTTAATCCTGGCATATATGGGACAAGCTGCATATCTGTCCAAGCATCATACTATTGAAAGTGATTACCGAATTGGGTTCTATGTATCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTATCATCACAGGTACTTTCTCAATAATCAAACAATGTTCTGCCATGGGATGCTTCCCCAAAGTCAAGATCATTCATACATCATCAAAGGTACACGGCCAGATTTATATTCCAGAGATCAACTGGTGTTTGATGCTACTTTGCTTGGCCATTACTGTTGGATTCAGAGATACAAAACGCATGGGAAATGCATCAGGCTTGGCTGTCATAACTGTCATGCTGGTGACCACTTGCCTAATGTCTCTAGTTATAGTGTTATGTTGGCATAAGAGTATTTTCCTAGCCATTTGCTTCATATTCTTCTTTGGCTCCATCGAAGCACTATACTTCTCTGCATCTGTCATCAAGTTCCTTGATGGGGCTTGGGTGCCCATTGTCCTCTCACTCATCTTTCTTATTGTCATGTATGTGTGGCACTATGGCACACTAAAGAAGTATGAGTTTGATGTTCAAAATAAGGTGTCCATCAATTGGCTTCTTGGTTTAGGCCCCACTCTAGGAATTGTTCGGGTTAGGGGAATTGGGCTCATACACACTGAGCTTGTGTCTGGGATCCCAGCTATTTTCTCTCACTTTGTTACCAATCTCCCAGCTTTTCATCAGGTTGTGATCTTCCTTTGCATCAAATCTGTCCCAGTGCCACATGTGAGACCTGAAGAAAGGTTCTTAGTTGGTAGAGTTGGCCCAAAGGAATATAGGCTTTATAGGTGCATAGCACGGTATGGTTATCGCGACTTTCACAAGGATGACATCGAGTTTGAGAAAGATCTTATTTGTAGCATAGCAGAATTTATATGCTCGGATACTTCTGAATGCGGCCTTGGATTTGAGAATTTTGGAGATGACACAAAGATGACAGTTGTTGGGACCTCAGCATCAAACTCAGAAGGTATAAGGATGTGTGAAGATGATCAAGATAATAATTCTGAAATAGAAGACACTTTAGAACTGAGGGTGGTTAAGTCTCCCGAAATTGTGAAGAAGCGAGTGAGGTTTGTTGTGCCAGACAGTCCACAAATTGATTTGGGTGCAAGGGAGGAGTTGCAGGAACTAATGCAAGCAAGGGAGGCAGGAATGGCATTTATAATGGGTCACTCATATGTGAAAGCAAAACGAGGATCAAGCTGGATAAAGAAAGTTGTGATCAACTATGGGTATGATTTCCTGAGGAGAAACTCTAGAGCATCAACTTATGCTCTAAGTATCCCTCATGCATCTATCCTAGAGGTGGGCATGATCTATCATGTCTGA 2331 0.4234 MDLESVIYKNSIKDESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHAQVGLLPNVQLADEELTEYTKDGTVPIDKMNVGLGLKSVLEKHKVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPVACVILVFLFALQHYGTHRVGFLFAPVVMTWLLCISCIGVYNILHWNPHVYEALSPFYMFKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTCLVYPSLILAYMGQAAYLSKHHTIESDYRIGFYVSVPEKIRWPVLAIAILQAVVGSQAIITGTFSIIKQCSAMGCFPKVKIIHTSSKVHGQIYIPEINWCLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWHKSIFLAICFIFFFGSIEALYFSASVIKFLDGAWVPIVLSLIFLIVMYVWHYGTLKKYEFDVQNKVSINWLLGLGPTLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCIKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDFHKDDIEFEKDLICSIAEFICSDTSECGLGFENFGDDTKMTVVGTSASNSEGIRMCEDDQDNNSEIEDTLELRVVKSPEIVKKRVRFVVPDSPQIDLGAREELQELMQAREAGMAFIMGHSYVKAKRGSSWIKKVVINYGYDFLRRNSRASTYALSIPHASILEVGMIYHV 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2121 776 PANTHER POTASSIUM TRANSPORTER 6 1 776 - -
Ssu4g2121 776 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu4g2121 776 TIGRFAM kup: potassium uptake protein 23 776 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu4g2121 776 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 776 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2121 Ssu-Chr4 44688758 44695358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2121 1 774 Inorganic Solute Cotransporters AT5G14880 76.765 0.0 1219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2121 K03549 - gmx:100793387 1383.24