Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2099 ATGAAGTTCAATCCAAGGGTTTCAAGCAGTCGCCGCAAGGCTCACCTCAACACGCCATCGAGCGTCCGCCGCATCCTGATAAGCGCGCCTCTCTCCAGCGACCTTCGCTCAAAGTACAATGTCGCTCCATTCTGGTTCGTAAGGATGACGAGGTGCAAGTCATGCGAGGAACCTACAAGGGCCGTGAAGGCAAGATCGTTCAAGTCTATCGCCGCAAGTGGGTGA 225 0.5511 MKFNPRVSSSRRKAHLNTPSSVRRILISAPLSSDLRSKYNVAPFWFVRMTRCKSCEEPTRAVKARSFKSIAASG 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2099 74 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 10 54 IPR005756 GO:0003735|GO:0006412|GO:0015934
Ssu4g2099 74 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 43 IPR005756 GO:0003735|GO:0006412|GO:0015934
Ssu4g2099 74 PANTHER 60S RIBOSOMAL PROTEIN L26-1-LIKE 1 43 - -
Ssu4g2099 74 Gene3D - 1 64 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2099 Ssu-Chr4 43236443 43236667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2099 1 41 Cytoplasmic Ribosomal Protein Gene Family AT5G67510 72.727 2.32e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2099 K02898 - tcc:18599319 68.5514