Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2074 ATGGAGTTGATTCTTTATCAGAGGTTCAGAATTCAGTTTCTAGTGGTAGATCATGATCCTCCTTCGACATCTGGGATTCCCCGGCCTTCTCGCCCTCCGTTAAGTTCATCTAGAAATTATGGGGCTTCTTCCAGTCAGCATAACTATGGAATGAAGACCGTCCACCATCAAAAGCATTCCTATCAGGAGGCTGGCAATGTGGAGTGCAATGGAATGCCCGATATGGAGAAGCAGTATTATAACGCTAACGACAAATCTGACTATGTGAGCCTCAATAAAGCTGTTGAAGGTTGTTTAGGAAAGAATATCTCTGCAATGGAAACAAAATCAAGCATCAAGCAACCATTAGATACTTCCAAGAATTGTGATTCTAGTGGCGTATTAGAATCTGACAAATGCAAATTAGGTTCATCAAAAGAAATTGTTGATCAAATAAAGAGTTGCTGTCAATCAGAGATTACTTTTTGTCCAAGTCCTCAGAATAGTTTCTATTCAGAAGCCAAGGAAAGTTTTGCCAATACTGGAGTCAGTGAATGTGTAAGTGTTGATAAGTCAGTTGAAAGTGGAGAAGTCACTAATTCCTGCGAATTTAATGAGAGCAGGAAGACCAGCATCTGTAGAGGGAGTACTGGAAGTGACATTAGCGATGAGAGCAGCACCAGTAGTTTGAGCAGTGCTTTGTACAAACCCCACAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCCATCCGAGCACGTGATGGGGCGTTGGAAATGAGACACTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCTGAGTTAAGTGGCACAAGGACTTGTTTTGCCATGAAAGTAATGAACAAAACCGAGCTGGCAAGTCGCAAGAAGCTTGTTAGGTCTcagacagagagagagatacTGCAGTCTCTAGATCATCCATTTCTACCCACATTATATACGCACTTTGAGACAGAGACATTCTCCTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCACTCAGGCAAAGACAAGCTGGGAAGTATTTTTCTGAGATTGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGGGTCATCTACAGAGACCTTAAGCCTGAGAATGTGTTGGTGAGAGAAGATGGTCATATAATGCTATCAGATTTTGATCTCTCTCTAAGATGTGCTGTCAGTCCAACTCTGGTGAAGTCATCAAACTCTAGCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTGCTTGCATTGAGCCAACTTGTGTAATGCAGCCAGACTGCATTCAACCTTCGTGTTTCACACCGCGCTTTTTCTCTGGCAAAtccaagaaagagaaaaagttgAAACCAAAGAATGATGTGCAAAATCAGGTGACCCCTCTCCCAGAACTTATTGCCGAGCCCACGAATGCGCGATCAATGTCCTTCGTGGGGACACACGAGTACCTGGCACCTGAAATTATCAAAGGCGAAGGGCATGGCAGTGCTGTGGACTGGTGGACATTTGGGATATTCTTATACGAGCTCTTGTTCGGTAGAACACCATTCAAAGGTTCGGCAAACCGAGCAACACTATTCAATGTTGTTGGCCAGCCCTTGAAATTTCCAGAATCCCCTACTGTCAGCTTTGCTGCCAGGGACTTGATCAGGGGTTTACTTGTGAAAGAGCCTCAGAATCGCCTTGCATATAGACGCGGAGCTACAGAAATAAAACAACATCCATTCTTTCATAATGTCAACTGGGCGCTGATCCGATGTGCAAATCCTCCAGAAGTTCCAAGACAGGCCATGAAAGCACTTGCAGCTGAAAAGGTGCCTGGAGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 1914 0.4305 MELILYQRFRIQFLVVDHDPPSTSGIPRPSRPPLSSSRNYGASSSQHNYGMKTVHHQKHSYQEAGNVECNGMPDMEKQYYNANDKSDYVSLNKAVEGCLGKNISAMETKSSIKQPLDTSKNCDSSGVLESDKCKLGSSKEIVDQIKSCCQSEITFCPSPQNSFYSEAKESFANTGVSECVSVDKSVESGEVTNSCEFNESRKTSICRGSTGSDISDESSTSSLSSALYKPHKANDIRWEAIQAIRARDGALEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELASRKKLVRSQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQAGKYFSEIAARFYVAEVLLALEYLHMLGVIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSSLETKSSGYCIQPACIEPTCVMQPDCIQPSCFTPRFFSGKSKKEKKLKPKNDVQNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLKFPESPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQAMKALAAEKVPGVKPSGNYLDIDFF 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2074 637 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 16 637 - -
Ssu4g2074 637 SUPERFAMILY Protein kinase-like (PK-like) 234 612 IPR011009 -
Ssu4g2074 637 Pfam Protein kinase domain 490 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g2074 637 Pfam Protein kinase domain 257 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g2074 637 SMART serkin_6 256 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g2074 637 Gene3D Phosphorylase Kinase; domain 1 254 335 - -
Ssu4g2074 637 CDD STKc_phototropin_like 254 613 - -
Ssu4g2074 637 Gene3D Transferase(Phosphotransferase) domain 1 336 405 - -
Ssu4g2074 637 Gene3D Transferase(Phosphotransferase) domain 1 488 610 - -
Ssu4g2074 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 377 389 IPR008271 GO:0004672|GO:0006468
Ssu4g2074 637 ProSiteProfiles Protein kinase domain profile. 256 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu4g2074 637 MobiDBLite consensus disorder prediction 29 47 - -
Ssu4g2074 637 PANTHER FLIPPASE KINASE 1-RELATED 16 637 - -
Ssu4g2074 637 MobiDBLite consensus disorder prediction 18 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2074 Ssu-Chr4 42062985 42065983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2074 160 637 AGC Kinase Gene Family AT5G47750 70.363 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ssu4g2074 Pkinase 4.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2074 K08286 - gmx:100802402 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2074 4 42062985 42065983 Ssu4g2074 4 42062985 42065983 ECH