Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2069 ATGGTTGCGCTTGGGATTGAAGAAGTCCTTGTAGCGGTTCTTCTTTTCGTTGTAATCCGCTACTGGAGGCTCAACAGACACACCCCAATTGCTAAGTGGCCCATTCTTGGAATGCTACCTGGTCTCTTGCTCAACATGCCCACCTTCTTTGATTATATAACTTCAGTTTTGAAACAAGAAAGAGGATTTGATCCTAATTGTCTTTCCATTGAATTCCCAGAAGTTGCATATGAGAGAGCCTTCGCTGAAGCAGAGGATGCCCTGTTCTACAGACATGTAATGCCAAGATGGATGTGGAAGCTGCTGAAATGGCTTCAAGTTGGCAAAGAGAAGAAGCTCAAAGAAGGCCTTGAAACTATTGACCAAATGTTGTATGAAAAAATCACCACATCCAAATGCAAAATGCAAAGCCAAAGTAGCACCCTAGCTGATGACTCACAGTTTAGCTTGctaaattttcttatgaataatGAAGTAGGGAAGGAGAAAGTTGATGACAAGTTTCTGAGAGACACAGCAATAAATCTCCTAGTAGCTGGGAAAGACACCATTAGTTCATGTCTCACTTGGTTTTTCTGGCTGGTGGAAACACACCCATCTGTAAAAGTAAAGAGTCTTGAAGAGATCCAAGCAAATTTACTACAAAGCAAAGCTAATTGGAAGGATTTAGGCGTGGAAAGACTTGGCAAGTTAGTTTACCTCCATGCAGCAGTGAGTGAAACCTTAAGGCTTTATCCTCCAATACCTACTGAGCACAAGTGTGCCTTAAAATCTGATGTGCTTCCTAGTGGTCATAGGATTAATGCAAATACCATGATATTATATTCTCTATACTCAATGGGGAGGGTTGAGGAAACATGGGGAGAAGATTGCTTGAAATTTAGACCAGAGAGGTGGATTTCAAAGAGAGGAAGGATTATTCACATACCCTCTTACAAGTTCATTGCTTTCAATGCAGGACCAAGAAGTTGTTTGGGTAAGAACATAAGCTTCAATGAGATAAAGATGATTGCTGCTTCTATACTGTGGAATTATAACATCCACTTGGTGGAAGGCCACCCCATATCCCCAGGTGTCTCCGTTCTCCTTTATATGAAACATGGCTTGAAGGTTTTGGTGACAAAGAGAAGCATTTGA 1137 0.409 MVALGIEEVLVAVLLFVVIRYWRLNRHTPIAKWPILGMLPGLLLNMPTFFDYITSVLKQERGFDPNCLSIEFPEVAYERAFAEAEDALFYRHVMPRWMWKLLKWLQVGKEKKLKEGLETIDQMLYEKITTSKCKMQSQSSTLADDSQFSLLNFLMNNEVGKEKVDDKFLRDTAINLLVAGKDTISSCLTWFFWLVETHPSVKVKSLEEIQANLLQSKANWKDLGVERLGKLVYLHAAVSETLRLYPPIPTEHKCALKSDVLPSGHRINANTMILYSLYSMGRVEETWGEDCLKFRPERWISKRGRIIHIPSYKFIAFNAGPRSCLGKNISFNEIKMIAASILWNYNIHLVEGHPISPGVSVLLYMKHGLKVLVTKRSI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2069 378 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 317 326 IPR017972 GO:0005506|GO:0016705
Ssu4g2069 378 PRINTS P450 superfamily signature 179 196 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 PRINTS P450 superfamily signature 324 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 PRINTS P450 superfamily signature 315 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 PRINTS P450 superfamily signature 236 247 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 PANTHER CYTOCHROME P450 62 377 - -
Ssu4g2069 378 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 62 - -
Ssu4g2069 378 SUPERFAMILY Cytochrome P450 62 376 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 PRINTS E-class P450 group I signature 235 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 PRINTS E-class P450 group I signature 168 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 PRINTS E-class P450 group I signature 314 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 PRINTS E-class P450 group I signature 324 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 PRINTS E-class P450 group I signature 188 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 Gene3D Cytochrome P450 43 376 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 Pfam Cytochrome P450 76 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2069 378 PANTHER CYTOCHROME P450 FAMILY PROTEIN 62 377 - -
Ssu4g2069 378 PANTHER CYTOCHROME P450 3 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2069 Ssu-Chr4 41859943 41861454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2069 62 377 Cytochrome P450 AT2G23180 46.296 3.67e-106 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2069 - - gmx:100785815 464.151