Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2043 ATGGTTGAGCTTTTGGCCATCATATTAACTTTCTTCTCAGGTCTTCTTGCCATTGCTTATCTTCTCAAATAtcttaacaaaaacaaacaagattCCCCACACAAATTGCCCCATGGAAGCATGGGGTGGCCCTTTGCTGGGGAGACTCTTGGCTTCCTCAAGCCTCATAGATCAAACTCCTTGGGAAGCTTCTTACAAGAACATTCTTCTAGGTATGGCAAAGTTTTCAAGTCACATTTGTTTGGTTCTCCCACCATAGTTTCCTGTGACTTCGAGCTCAACATGTATGTTCTTCAGAATGAAGGGAAATTATTCCCGGTTGAATACCCCAAGGTGATGCATAACATCCTGGGGAAGTTCTCTCTGCTTCTTGTCAAAGGAGACCTTCACAGGAAGCTAAGAAACACCGTTATCAATTTTGTCAGTGCAACAAAGCACGAATCCAACTTCCTCCACTGTGTTGAAATGCTTGCACTCTCAAGGATTAACTCATGGGATCCAATCTCTAAACAAGTTGCTTTCTATGAAGAAGCCAAAAGGTTTACCATCAATGTTATGATGAAGCACCTACTGAACATTAATCCTGATGAGCCACTAGCCTCCAAGATTTTAGGAAACTTTGAGAACTACATCCAGGGCTTTATTTCATTGCCAATAAATATACCCGGGACTGCATATTTCAAGGCTTTGCAGGCTAGAATAAGACTCTCGGCCATTATCAAAGATATTATATTGGAGAGGCGTAAATGTAATAATGTGAGGCCTGAGGAAGGAGGGGACCTCTTGAATGTGATTTTGTCAAAGCAGAACCTAAGTGATGAAGAGATGGTGAGCCTTGTGTTGGACCTCTTGTTTGGGGGTTATGAGACCACTGCAAAACTTCTGTCCTTGATTGTCTATTTCCTTGGTGGAGCCTCTAATGCTTTAGAAAGGTTAAAGGAAGAACACCAAGagataaggaaaagaaaaaaggagggaGAACTACTAAACTGGGAAGATTATAAGCAAATGGAGTTCACTCAAAAGGTGATGTACGAAGCTATGAGATGTGGTAATGTAGTCAAATATTTGCACAGGAAAGCTGTTCAAGATGTCAAATTCAAAGATTATGTGATACCCGCAGGGTGGAAGGTTCTTCCTGTCTTGTCTTCTGGACATTTGGATCCCACcctttttgaaaatcctttggAGTTCAATCCCTTTCGGTGGAATGACAATTCGACAAGCAAGAAAGCGGCACCATTTGGTGGGGGTCCACGACTCTGTCCAGGGGCTGATCTAGCAAAAGTGGAGACAGCATTCTTCCTTCATCATCTTGTCCTTAATTATAGGTGGAAAATCAAGCCAGATGATCCCCCACTTGCTTTCCCGTACGTGGAATTCACGGGAGGGCTGCTATTGGATCTTGAACCCATGGGCTCTACTTTTGGGGAACACCTTTGA 1443 0.4123 MVELLAIILTFFSGLLAIAYLLKYLNKNKQDSPHKLPHGSMGWPFAGETLGFLKPHRSNSLGSFLQEHSSRYGKVFKSHLFGSPTIVSCDFELNMYVLQNEGKLFPVEYPKVMHNILGKFSLLLVKGDLHRKLRNTVINFVSATKHESNFLHCVEMLALSRINSWDPISKQVAFYEEAKRFTINVMMKHLLNINPDEPLASKILGNFENYIQGFISLPINIPGTAYFKALQARIRLSAIIKDIILERRKCNNVRPEEGGDLLNVILSKQNLSDEEMVSLVLDLLFGGYETTAKLLSLIVYFLGGASNALERLKEEHQEIRKRKKEGELLNWEDYKQMEFTQKVMYEAMRCGNVVKYLHRKAVQDVKFKDYVIPAGWKVLPVLSSGHLDPTLFENPLEFNPFRWNDNSTSKKAAPFGGGPRLCPGADLAKVETAFFLHHLVLNYRWKIKPDDPPLAFPYVEFTGGLLLDLEPMGSTFGEHL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2043 480 PANTHER CYTOCHROME P450 26 39 471 - -
Ssu4g2043 480 PANTHER CYTOCHROME P450, FAMILY 724, SUBFAMILY A, POLYPEPTIDE 1 39 471 - -
Ssu4g2043 480 Coils Coil 302 329 - -
Ssu4g2043 480 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 Gene3D Cytochrome P450 25 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 SUPERFAMILY Cytochrome P450 32 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 Pfam Cytochrome P450 37 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Ssu4g2043 480 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g2043 480 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2043 Ssu-Chr4 40751123 40757754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2043 41 367 Cytochrome P450 AT5G14400 55.287 4.00e-131 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2043 K12639 - gmx:100791737 879.011