Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2005 ATGCCAAGTGTGGCTGTGAAGCTCTACAGCGTGTTCTTCAAGTTCCTCTTGAAGCACCGTTTGCAGAACCGAATCCAAACCCTTCCCGAGCACTCCGACCCCTTCGGCGTCACGACCCGACCCGAAGAAACCGTCGCCGCCGCCAACGCCTCTTTCTCCGACGGCGTCGCCACCAAGGACATCCACATCGACCCGTTAACCTCTCTCTCCATCCGAATCTTCCTCCCCGAGTCGGCCCTCACCCCTCCCGAGCCTCACTCCAAGCCTGGGCCCGCTCCCGAGCCTCGATCCGCGCCGGTTCCGCGGCGCAACAGCTACGGCCCCCCGCCGCGGGAGGAGCCCCGAGGCAACGGCGTCGCCTCGGGGGGCCGCGTCGAGGGTTTGCACTTGATGTGTGACGGCGTCTACCGGGGCTACGCGCCGGCGCAGGGGGAGCGGCGGAGGCTGCCGGTGATGCTGCAGTTCCACGGCGGCGGGTGGGTGAGCGGCGGGAGCGATTCCGTGGCGAACGATGCGTTCTGCCGGCGGATCGCGAAGCTCTGCGACGTGGTGGTGGTCGCGGTGGGGTACCGGCTGGCGCCGGAGAACCGGTGCCCGGCGGCGTTCGAGGACGGTGTGAAGGTGCTGAATTGGCTGGCGAAGCAGGCGAATTTGGCGGAGTGTAGCAGGTCGATGGGGGGTGGAAAGGGTGGAGGgcatggtggtggtggggagTTTAAGAAGTCGGATGCTCATAAGCATATTGTGGATTCCTTTGGGGCTTCAGTGGTTGAGCCTTGGTTGGCTGCTCATGCTGATCCTTCAAGatGTGTTCTTCTTGGAACGAGTTGTGGTGCCAATATTGCAGACTACGTCGCTCGAAAAGCTGTGGAAGGAGGCAAATTTCTGGACCCTGTCAAGGTGGTTGCGCAGGTCTTGATGTATCCATTTTTCATTGGAAGTGTTCCCACACGTTCTGAAATAAAGTTGGCAAACTCTTACTTTTATGACAAGGCCATGTGTATACTTGCCTGGAAACTTTTTCTACCTGAGGAGGAATTTAGTTTGGACCATCCAGCTGCTAATCCCCTTGTCCCAGGCCGGGGTCCTCCTTTGAAGTTGATGCCTCCAACATTGACAGTTGTGGCAGAACATGACTGGATGAGGGATCGTGCCATTGCTTACTCAGAGGAGCTCCGGAAGGTGAATGTTGATGCACCTGTTCTTGAGTATAAGGATGCAGTACATGAATTTGCAACCCTTGACGTCCTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATTGCCATATGGGTGAAGAAATATATCTCACTTCGAGGTCATGAATTCTCATATTGA 1344 0.5655 MPSVAVKLYSVFFKFLLKHRLQNRIQTLPEHSDPFGVTTRPEETVAAANASFSDGVATKDIHIDPLTSLSIRIFLPESALTPPEPHSKPGPAPEPRSAPVPRRNSYGPPPREEPRGNGVASGGRVEGLHLMCDGVYRGYAPAQGERRRLPVMLQFHGGGWVSGGSDSVANDAFCRRIAKLCDVVVVAVGYRLAPENRCPAAFEDGVKVLNWLAKQANLAECSRSMGGGKGGGHGGGGEFKKSDAHKHIVDSFGASVVEPWLAAHADPSRCVLLGTSCGANIADYVARKAVEGGKFLDPVKVVAQVLMYPFFIGSVPTRSEIKLANSYFYDKAMCILAWKLFLPEEEFSLDHPAANPLVPGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWVKKYISLRGHEFSY 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2005 447 Gene3D alpha/beta hydrolase 36 441 IPR029058 -
Ssu4g2005 447 PANTHER CARBOXYLESTERASE 16-RELATED 25 427 - -
Ssu4g2005 447 PANTHER ARYLACETAMIDE DEACETYLASE 25 427 - -
Ssu4g2005 447 SUPERFAMILY alpha/beta-Hydrolases 135 438 IPR029058 -
Ssu4g2005 447 MobiDBLite consensus disorder prediction 82 107 - -
Ssu4g2005 447 Pfam alpha/beta hydrolase fold 152 412 IPR013094 GO:0016787
Ssu4g2005 447 MobiDBLite consensus disorder prediction 79 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2005 Ssu-Chr4 39251517 39254960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2005 1 447 Carbohydrate Esterase AT3G27320 75.610 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2005 - - gmx:100791894 785.793