Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1984 ATGAACACAAATAGTGCTTCTAGTAGGGTTTTGAGTACAGTTTATTGGCCTGGAGGTATACAATTTGTTCCTAAGGGATGGACTCACAGCACCGAAGAGAGGACATTGCAAATAGGAGTGCCTGCAAAAGGTGCCTTCACTGAGTTTGTGAATGTTGCATATGATGAGAACAGGAATAAAACTTCTATCACCGGATTCTCAATCAATGTCTTTAAAGCAGCCGTTAATAATTTGCCTTATGACTTGGAATTCAAGTTTGTTCCCTTCAATGGGTCTTATGATGAAATGGTAGAGCAAGTCTACAATAAGGTATTTCCCAAGGATTCCACTCTGGCTACTGACATATCCGAGGCATTGCTTAAAGTGATAGAGAGTGGAGAAACTGAACAACTAGAAAACGATATGCTAACGATAGGAGGCAATGCCAGTTGTTCTCCTAAGGCAAAAGATGGGTCATCCACCGGATTTCAACCTTTCCTTGGCCTATTTTACATCTGTTCTATTGTTGCTATTCTGgcattgttatataatatgatttgttTGTTCATGAAGAATGTAGAGACCTTCACTAGCTACATACATGTAACACTAACACAATTAAAGAGAATATGGAGATGGACAACCACATATTTTTCTCGGAGCTGTTCAAGACTCCAATCAGGGAGTATGAGAAGTGTAACTATTGCCACAGTAACAAGAAATGCAGAGGAGACAGTCATTAATAGTCAGCAAAGCACGGTGGTTGTTGAGCTTATAGATGTAGTATTGGCTACTCATGCTTCCCGAGCTATTGATTTTTCAAACTGTTGTAAAAAGCATTTCACTGCCAAAGATTTAAAGGATTTGGACACACATTTTCTTTTGGTGATCCTGAGACAATATgatgttttgagataa 897 0.3779 MNTNSASSRVLSTVYWPGGIQFVPKGWTHSTEERTLQIGVPAKGAFTEFVNVAYDENRNKTSITGFSINVFKAAVNNLPYDLEFKFVPFNGSYDEMVEQVYNKVFPKDSTLATDISEALLKVIESGETEQLENDMLTIGGNASCSPKAKDGSSTGFQPFLGLFYICSIVAILALLYNMICLFMKNVETFTSYIHVTLTQLKRIWRWTTTYFSRSCSRLQSGSMRSVTIATVTRNAEETVINSQQSTVVVELIDVVLATHASRAIDFSNCCKKHFTAKDLKDLDTHFLLVILRQYDVLR 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1984 298 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 104 218 - -
Ssu4g1984 298 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 102 - -
Ssu4g1984 298 SUPERFAMILY Periplasmic binding protein-like II 10 103 - -
Ssu4g1984 298 Gene3D - 28 105 - -
Ssu4g1984 298 PANTHER GLUTAMATE RECEPTOR 104 218 - -
Ssu4g1984 298 PANTHER GLUTAMATE RECEPTOR 3 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1984 Ssu-Chr4 38458743 38461438 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1984 5 101 Ion Channels AT5G11210 44.231 1.67e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1984 - - gmx:100777873 235.728