Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1923 ATGGGAGCGTTACGGGAGAAGCTCTCGTTGTTCTACAAGAGCAGATGGCTGGTGTTCGTGGCCGCAATGTGGTTGCAGTCATGGGCGGGTATCGGGTACTTGTTCGGCAGCATATCGCCGGTGATAAAGAGTTCCCTGAACTACAACCAGAAGCAGCTTGCGGTGTTGGGAGTGGCCAAGGACCTCGGGGACAGCGTGGGGTTCGTGACTGGGGTGCTGTGTGAGATTCTGCCCATCTGGGGTGCGCTCCTTGTTGGCGCTGCTTTGAGCCTTGTGGGCTATGGTTGGGTCTGGCTGGTTGTCACTGCCCAAGTTCCAGCTCTGCCTTTGTGGGCTATGTGTGTTCTTATCTTTGTGGGAACAAATGGTGAAACCTACTTCAACACAGTTTCTCTGGTGTCTTGTGTACAAAATTTCCCCAAAAGCCGGGGTCCTGTGGTTGGAATTTTAAAGGGCTTTGCTGGGTTGAGTGGTGCAATCCTGACACAGATATATGCATTGTTCCATTCCCCTGATCATGCATCATTAATATTTATGGTTGCTGTTGGTCCTGCATTGGTAGGAATAGGTCTTATGTTCATTGTTAGGCCAGTTGGGGGTCACAAACAAGTCCGGCCATCAGATGGCAAATGCTTCACATTTGTCTATGGTGTGTGTCTCCTATTGGCTGCTTATTTGTTGGGAGTCATGGTTGTCCAAGATCTAGTTGAAGTGAGTGAAACTGTAGTCACAATATTCACAGTGATTCTCTTGTTGATCCTCATTGTCCCAATTGTTATTCCCATTTCATTGAGTTTTGGCCCAGAGCAAAAGCATCCGGAGGAAGAGGCGCTTCTTCCAGAACCAAAGAATAAAGAACCTGGGAAATCTCAGCTGGATTCTGATGAAGTAATATTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACATGCTCCCTGCATTAGAGAGGCAGAAACGTATAGCACACTTACAAACAAGACTGCTCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTTAAGAGGAGGAGAGGACCACACAGAGGGGAAGATTTCACCTTGATGCAAGCATTGATCAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGATCATGGGTTCTGGATCCGGGTTAACTGTAATTGACAATCTGGGTCAGATGAGCCAGTCTCTAGGATATGACAATGCCCATATATTTGTCTCCATGATCAGTATTTGGAACTTCCTTGGCCGCGTTGGTGGTGGTTACATATCCGAGCTTGTTGTGAgGGATCATGCGTATCCAAGACCAACCGCGTTGGCTGTATTTCAACTCATTATGACTGTTGGGCATGTTTTCATTGGCATGGGATGGCCAGGGTCAATGTATGTTGGAACTTTACTTGTTGGACTTGGTTATGGTGCTCATTGGGCAATTGTTCCAGCCACTGCCTctgagttgtttggtttgagaaactTTGGTGCAGTGTACAATTTCCTTACTCTGGCAAACCCTGCAGGAACATTGGTCTTCTCTAGTCTCATTGCCAGCACCATCTATGATTCTGAAGCAGAGAAACAACATCCCCATCACCATAATATGGGATCATTGATGTTGCGTGAGCAGGATGTTAGTGATTCTCTGAAGTGTGAAGGTTACGTGTGCTTTTTCCTAACTTCAATGTTCATGGCAGGATTCTGCGTTGTTGCAGCAGGCCTATGCACGGTTCTCGTGTTAAGAACAAGGATTGTGTATGCCAACCTATATGGAAAATCTTCTTCTAGTAGGCTTCGAATATGA 1779 0.4615 MGALREKLSLFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLNYNQKQLAVLGVAKDLGDSVGFVTGVLCEILPIWGALLVGAALSLVGYGWVWLVVTAQVPALPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALFHSPDHASLIFMVAVGPALVGIGLMFIVRPVGGHKQVRPSDGKCFTFVYGVCLLLAAYLLGVMVVQDLVEVSETVVTIFTVILLLILIVPIVIPISLSFGPEQKHPEEEALLPEPKNKEPGKSQLDSDEVILSELEDEKPKEVDMLPALERQKRIAHLQTRLLQAAAEGAVRVKRRRGPHRGEDFTLMQALIKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISELVVRDHAYPRPTALAVFQLIMTVGHVFIGMGWPGSMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGAVYNFLTLANPAGTLVFSSLIASTIYDSEAEKQHPHHHNMGSLMLREQDVSDSLKCEGYVCFFLTSMFMAGFCVVAAGLCTVLVLRTRIVYANLYGKSSSSRLRI 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1923 592 MobiDBLite consensus disorder prediction 273 294 - -
Ssu4g1923 592 CDD MFS_Mch1p_like 14 564 - -
Ssu4g1923 592 SUPERFAMILY MFS general substrate transporter 212 574 IPR036259 -
Ssu4g1923 592 MobiDBLite consensus disorder prediction 273 292 - -
Ssu4g1923 592 Pfam Nodulin-like 15 262 IPR010658 -
Ssu4g1923 592 SUPERFAMILY MFS general substrate transporter 10 200 IPR036259 -
Ssu4g1923 592 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 4 586 - -
Ssu4g1923 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 586 - -
Ssu4g1923 592 Gene3D MFS general substrate transporter like domains 356 577 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1923 Ssu-Chr4 36284812 36288391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1923 5 587 Nodulin-like Gene Family AT5G14120 70.307 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1923 - - gmx:100796700 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1923 4 36284812 36288391 Ssu4g1923 4 36284812 36288391 ECH