Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu4g1911 | ATGACGATCGCTTTAAAGCCACCGATTGGGTTGCGCTTCCTCCAACCACCACCTCTTTCGCCCGTTCCCATATCGTTCAAGTTCCCAACCACTCAGCTTCCCAGAATCAACTGCAACTACTCCTCTTTTGAAGTTAGAGATGTTAGCTATCAACCACCGGGGACTCAGCTTAGACTTCTAAACTCAGTTAGTTTTTCGCTTCCAGAGAAAAGTTTTGGTCTAATTTTCGGACAGAGTGGAAGTGGAAAAACAACTCTGTTGCAGCTTCTTGCAGGAATAAGCAAACCAACCTCGGGATCTATTTACATCCAAAAATATGGGAATGATGGAAATCCTAGTCATCCTCCAGAGCCCTTGGTGCCGGAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTATTTTGTGGCTGATAATGTGCTTGATGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAACCATCACCTGAGGGAGAATCTTGCTCTAGGGCTGCAGAGGGCAATTAACTGGGTTGGATTAAGTGGTATATCATTGGATAAAAATCCTCACTCCCTCAGTGGTGGTTACAAACGTCGTCTTGCCTTGGCAATACAATTAGTACAAACCCCTGATCTATTGATATTGGATGAACCACTTGCTGGACTCGATTGGAAAGCACGTGCAGATGTTGTGAAGCTTCTGAAGCATCTGAAAAAGGAATTAACTGTGCTAGTTGTTAGCCACGATTTGAGAGAGTTCGCAAGTCTAGTTGATCGATCATGGAGAATGGAAATGGGGGGCAACCTTAGAGAGGAATTTCTACCATTATAA | 813 | 0.4453 | MTIALKPPIGLRFLQPPPLSPVPISFKFPTTQLPRINCNYSSFEVRDVSYQPPGTQLRLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIYIQKYGNDGNPSHPPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGNHHLRENLALGLQRAINWVGLSGISLDKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLREFASLVDRSWRMEMGGNLREEFLPL | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu4g1911 | 270 | SMART | AAA_5 | 69 | 261 | IPR003593 | - | |
Ssu4g1911 | 270 | PANTHER | ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC | 29 | 266 | - | - | |
Ssu4g1911 | 270 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 42 | 260 | IPR027417 | - | |
Ssu4g1911 | 270 | Pfam | ABC transporter | 60 | 213 | IPR003439 | GO:0005524 | |
Ssu4g1911 | 270 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 43 | 268 | IPR003439 | GO:0005524 | |
Ssu4g1911 | 270 | Gene3D | - | 35 | 267 | IPR027417 | - | |
Ssu4g1911 | 270 | CDD | ABC_cobalt_CbiO_domain1 | 44 | 260 | IPR015856 | GO:0005524|GO:0016020|GO:0055085 | |
Ssu4g1911 | 270 | PANTHER | HEAVY METAL TRANSPORTER | 29 | 266 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu4g1911 | Ssu-Chr4 | 35669110 | 35678079 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu4g1911 | 44 | 244 | Calmodulin-binding Proteins | AT2G36910 | 25.943 | 5.50e-11 | 60.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu4g1911 | - | - | vun:114196181 | 497.278 |