Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1865 ATGGCTCTCCCCGACTCTTCCTCTCGCCGCAACTCTCTCATCCCCTCCTTCATCTACTCCTCCTCCTCCAAAACGCTTCCTCTTCACCAGATGCTCAACTCCGGCGCCGCCTCCTCGCCGCCGGCCACCCTCGACGGCGGATCGCGCGGCCTCATGGTTCCCTCTCCCAGCGAGCCGCGCAAGATCGAGATGTACTCGCCCGCCTTCTACGCCGCCTGCACCGCCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGGCCGTCACTCCTCTTGACCTAGTCAAGTGTAATATGcagATTGACCCTGCTAAGTACAAGAGCATCTCGTCTGGGTTTGGAGTTTTGCTTAAGGAGCAGGGATTCAGGGGCTTTTTCCGTGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCAAGCAAGTACAAGACCTTGATCTACCTTGCTGGTTCGGCATCTGCAGAGGTTATTGCTGATGTTGCGCTTTGCCCCTTCGAGGCTGTGAAAGTCCGTGTCCAAACTCAGCCTGGTTTTGCAAGGGGTTTGGGTGATGGGCTCCCAAAATTTGTCAAATCTGAAGGAACCTTAGGGCTGTACAAGGGAATAGTGCCTCTGTGGGGACGGCAGATTCCATACACAATGATGAAGTTTGCTTCTTTTGAGACCATTGTTGAGCTGCTCTATAAGCATGCCATCCCCACACCAAAGAATGAGTGCAGCAAAAGTCTGCAACTTGGTGTCAGTTTTGCTGGTGGATATGTTGCTGGTGTATTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAATGCGAAGGGAGCAACAGTTGGGGATGCGGTGAAGAAGCTTGGCTTGTGGGGTCTCTTTACCCGTGGTCTTCCCCTCCGTATTGTTATGATTGGAACTCTTACTGGAGCCCAATGGGGAATATATGATGCATTCAAAGTCTTTGTCGGGCTGCCAACCACCGGTGGTCCTGCTCCTGCAGCTGCTCCAGCTCTTGGTGCTAGTGAGCTTGCAAAGGCATAG 1113 0.5202 MALPDSSSRRNSLIPSFIYSSSSKTLPLHQMLNSGAASSPPATLDGGSRGLMVPSPSEPRKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGFRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELLYKHAIPTPKNECSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPALGASELAKA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1865 370 Gene3D Mitochondrial carrier domain 68 346 IPR023395 -
Ssu4g1865 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 266 345 IPR018108 -
Ssu4g1865 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 249 IPR018108 -
Ssu4g1865 370 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 6 362 - -
Ssu4g1865 370 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 362 IPR044677 GO:0005315|GO:1990547
Ssu4g1865 370 Pfam Mitochondrial carrier protein 71 154 IPR018108 -
Ssu4g1865 370 Pfam Mitochondrial carrier protein 167 253 IPR018108 -
Ssu4g1865 370 SUPERFAMILY Mitochondrial carrier 71 341 IPR023395 -
Ssu4g1865 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 68 152 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1865 Ssu-Chr4 34075318 34078464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1865 7 370 Chloroplast and Mitochondria Gene Families AT5G14040 78.249 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1865 K15102 - gmx:548006 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1865 4 34075318 34078464 Ssu4g1865 4 34075318 34078464 ECH
Ssu4g1865 4 34075318 34078464 Ssu9g0315 9 15994117 15997892 PCT