Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1842 ATGCAGGAAGGAGGAGAAACGAAGACAGAGACCATGGAAAGCAGCAACAGAGACGAAGCGGAAGTCGAGAACGAGGAATTTGATGCTTCGGAGATCGAGTACGTTAGTTACGGCGGCGAGCATCACCTCCCTCTCATAATGAACCTCGTGGACCAAGAACTCAGCGAACCTTACTCCATCTTCACGTACCGTTACTTCGTCTATCTCTGGCCTCAGCTTTCTTTCCTGGCGTTTCACAAGGGTAAATGCGTGGGCACGGTGGTTTGTAAGATGGGGGAACACCGTAACACTTTCAGAGGGTACATTGCCATGCTGGTTGTGATCAAGCCCTACAGAGGAAGAGGCATTGCTACAGAGCTTGTTACTAGGTCTATCAAGGTGATGATGGAATCAGGTTGTGAAGaggTTACATTGGAGGCGGAAGTGACAAATAAAGGAGCACTGGCACTTTATGGTCGCCTTGGCTTTATTAGGGCTAAGCGGCTCTTTCACTACTATTTGAATGGAGTTGATGCTTTCCGTCTGAAACTTTTATTTCCCCGCTCAGAGTTGCACCCATCTCTGCCTATGATGGCAGATAAATACGAGAGCCACATGCAAAGTGATCATGGTGATGCATCATTTAAAGAATGA 633 0.4724 MQEGGETKTETMESSNRDEAEVENEEFDASEIEYVSYGGEHHLPLIMNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCVGTVVCKMGEHRNTFRGYIAMLVVIKPYRGRGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLLFPRSELHPSLPMMADKYESHMQSDHGDASFKE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1842 210 CDD NAT_SF 74 139 - -
Ssu4g1842 210 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 14 180 IPR044542 GO:0004596|GO:0017196
Ssu4g1842 210 Pfam Acetyltransferase (GNAT) family 67 156 IPR000182 GO:0016407
Ssu4g1842 210 MobiDBLite consensus disorder prediction 1 26 - -
Ssu4g1842 210 Gene3D - 39 207 - -
Ssu4g1842 210 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 30 180 IPR000182 GO:0016407
Ssu4g1842 210 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 40 180 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu4g1842 Acetyltransf_1 2.6e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1842 K00670 - gmx:100806790 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1842 4 33653688 33657638 Ssu4g1842 4 33653688 33657638 ECH